Gene Reut_B5716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5716 
Symbol 
ID3613430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2543724 
End bp2545172 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content62% 
IMG OID637695148 
Productmajor facilitator transporter 
Protein accessionYP_299904 
Protein GI73539537 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCACA TCGACGGAAC GAAGTCATTC TCAGACAGTA ACTCCCGCTC CTCCCATCTG 
TTGGCGCGGT TCGACCGCTT GCCAACCATG AGCACGCATT ACGCCTGGGC GGCATTGCTG
GCAATCAACT TGATGCTGGA GTATTACGAC AACGCCATCT TTTCGTACGC TGCGCCGACC
ATCAAGGCGC ACACGGGCAT GAGTACCGAG CAGATCGGGG TTATCAGCAG CGCCCTCTAC
GTGGGGATGG TGATTGGCGC GCTGGCCGGC GGTTGGCTCT CCGACAGGGT GGGGCGTCGT
CCAGTGCTGG TGTGGGGCAC GGTCATGTAC TCGCTCGGCG TGATCGTGAC GGCGTTCGTC
CCAGGGTACG AGATGATCCT GACCTCCCGC TTCGTGACTG GACTGGGCGT GCAGGCGGCC
ACGTCGGTGC TGCTCGTCTA CGTCGCCGAG ATGTTCCCAC GCCATGCACG CGGACGTTTT
CTCTCGCTCG TGACGATGGG CTACACAGCC TCGGCAGTGA TTGCGGCGGC ATTGGCCATG
TTTTACCTGC CTACGGGCGG ACCGAACACC TGGCGGTACC TGTTCTTGGC CGGCGGCATC
GGCTTGCTGA TTGCGCCCCT CGTGTATTTT TATCTGCCGG AGTCAGTGCG CTGGTGCGTC
TCTCGCGGGA AGCTCGAGCA CGCAGCGCAG ATTGTCGCCA GCCTGGAAGC GCGCGCGTTG
CGCAAGGGGC CGCTCGACGA CCCCAATCCG CTGGCAGCGC AAGGCGGCGC AGCGAATGCC
ACCTTGCGGG ACCTGCTGCG GAACAAGGGG GTCTTGCGCA ACCTGATCGT TCTGTTTGTG
TCCTATTTCG GGGTGTACCT GGCGTACTAC ACTTGGATCA ACTGGAGCAT CTACGCGCTG
GTGTATGGTC TCAAATACCC CCAGAAGGAC GCGTATTTCA TCATGTTCAT CTGGGTCGTG
GTCTACGGTG TAATGCCTTT CATTGCCATG CGACTGCTGG ATCGGTGGGA ACGCAAGAAC
ACCATCCTCT GCATGTCGGT GTTCTGCGCG CTCGCGTTGG TTGTGCTGGG CCTTTCAACC
AGCTATTGGG CCGTGGCCGT TATCGGCGGG GCGCTCGCCA TCTTCAGTGG CTTCGTACTC
AACGCCTACT ACACATATAT CCCCGAGACA ATGCCAACGC AGTTGCGTGC CTTGGGCAAT
GGCATCGTGA TGTCGGGTGC GCGGGTCGGC GGCGTGGTGT CCGGCGTGAT GGGCGCGGCG
CTGGTCACTG CGGGTGGCCT GAAGTACGTA ACGTGGACCG CCGCCGCCAT CTACATCGCC
TTCGCCATCC CCGTGCTTAT CTTCGGCCCG CGCACCACCA ACCGTTCGCT GGAAGCAGTA
GCCGACGAAG AATTGGGCCT TGGGACGTCA TGCGACCCCA CCAAGTCAGC CGCGCACGCT
GCCGCATGA
 
Protein sequence
MSHIDGTKSF SDSNSRSSHL LARFDRLPTM STHYAWAALL AINLMLEYYD NAIFSYAAPT 
IKAHTGMSTE QIGVISSALY VGMVIGALAG GWLSDRVGRR PVLVWGTVMY SLGVIVTAFV
PGYEMILTSR FVTGLGVQAA TSVLLVYVAE MFPRHARGRF LSLVTMGYTA SAVIAAALAM
FYLPTGGPNT WRYLFLAGGI GLLIAPLVYF YLPESVRWCV SRGKLEHAAQ IVASLEARAL
RKGPLDDPNP LAAQGGAANA TLRDLLRNKG VLRNLIVLFV SYFGVYLAYY TWINWSIYAL
VYGLKYPQKD AYFIMFIWVV VYGVMPFIAM RLLDRWERKN TILCMSVFCA LALVVLGLST
SYWAVAVIGG ALAIFSGFVL NAYYTYIPET MPTQLRALGN GIVMSGARVG GVVSGVMGAA
LVTAGGLKYV TWTAAAIYIA FAIPVLIFGP RTTNRSLEAV ADEELGLGTS CDPTKSAAHA
AA