Gene Reut_B5561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5561 
Symbol 
ID3612856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2377600 
End bp2379066 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content65% 
IMG OID637694994 
Productpeptidase S1C, Do 
Protein accessionYP_299750 
Protein GI73539383 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCC AGACCATTGC ACGTACCGCC ATTGGCATTG CTGCACTCGC CGCCATTGGT 
GGAGGCTATG CCTACCTGCA GAAGGAAGTC ATAACGCCGG GGTACGCCGC ATCCGCGCCG
GCGGTCTCGG CCGCACCCGC GCAAGCCGCT GCGGTGGCGA CGCCGATGGA TTTCTCCGGC
ATCGTCGACC AGTATGGCCC AGCCGTGGTC AATATCAGCG TGACCGCGCG TGCGCAGCGC
ACCGCTATGC AGGCACCGTC CGGCATGGAC CCCGACGATC CGCTGTTCCA GTTCTTCAAG
CGTTTTGGGC CCCAGTTCCA GGGGCCGCAG AGCGGTCAGC AACTGGTCAA GGGCCTGGGT
TCCGGCTTTA TCGTGAGCCC GGATGGTCTG ATCCTGACCA ACGCGCACGT CGTGGATGGC
GCGCAGGAGG TCACTGTGAA GCTGACCGAC CGGCGCGAGT TCAAGGCCAA GGTGCTGGGC
ACGGACCCGC AGACCGACGT GGCCGTGATC CGCATCGATG CCAAAGACCT GCCCACGGTC
CGGCTCGGCG ACCCGGCACG CGTGAAGGTT GGTGAGCCCG TACTGGCCAT CGGCTCGCCT
TACGGATTCG AGAACACGGT GACCGCCGGT ATCGTCAGCG CCAAGTCGCG CTCACTGCCT
GACGACACCT ATGTGCCGTT CATCCAGACC GACGTGGCCG TGAACCCTGG CAATTCCGGA
GGCCCCTTGT TCAACCAGCG CGGCGAGGTG ATCGGCATCA ATTCGCAGAT CTACAGCCAG
ACCGGCGGCT ACCAGGGGTT GTCGTTCGCA ATTCCGATCA ACGTCGCGAC CAAGGTCGAA
CAGCAGCTCG TGGCGCACGG CAAGGTCACG CGCGGCCGTC TAGGCATCTC GGTGCAGGAA
GTCAACCAAG CGCTCGCGCA GTCGTTCGGC CTGCCCAAGC CGTCGGGTGC GCTCGTGAAT
TCGGTCGAGG CTGACAGCCC CGCTGCCAAG GCGGGCGTAA AGCCTGGCGA TGTCATCGTG
CAACTCGACG ACGACGTGAT CGACCACTCC GGAGACTTGC CTGAGCACGT TGCCGATATC
AAGCCGGGCA CGCAGACCAC GCTGAAGATC ATCCGCAAGG GCCAGCCGAT GACGCTCGCG
GTGAAGGTGG GCGCCGCCAA GGAGGAATCG GTCGCGCAGA AGGGTAACGA CAGTCAGGCC
GGCGGACGGC TGGGCCTGGC CGTCCGCTCG CTGACGCCTT CGGAACGGCG CGAAAGCGGG
ATCGATGGCG GACTCGTGGT GGAGGATGTC GCCGGCCCGG CTGCGCGCGT GGGCATCCAG
CCGGGCGACG TGATCCTGTC GCTCAACGGC ACGCCGATTA CGTCGGCCGA CCAACTGCGC
GCTCTGGTTG CCAAATCCGG CAAGCAGGTG GCACTCCTGG TGCAGCGCGA TGAGGCGCGC
ATCTTCATTC CGCTCGACCT CGGCTGA
 
Protein sequence
MIRQTIARTA IGIAALAAIG GGYAYLQKEV ITPGYAASAP AVSAAPAQAA AVATPMDFSG 
IVDQYGPAVV NISVTARAQR TAMQAPSGMD PDDPLFQFFK RFGPQFQGPQ SGQQLVKGLG
SGFIVSPDGL ILTNAHVVDG AQEVTVKLTD RREFKAKVLG TDPQTDVAVI RIDAKDLPTV
RLGDPARVKV GEPVLAIGSP YGFENTVTAG IVSAKSRSLP DDTYVPFIQT DVAVNPGNSG
GPLFNQRGEV IGINSQIYSQ TGGYQGLSFA IPINVATKVE QQLVAHGKVT RGRLGISVQE
VNQALAQSFG LPKPSGALVN SVEADSPAAK AGVKPGDVIV QLDDDVIDHS GDLPEHVADI
KPGTQTTLKI IRKGQPMTLA VKVGAAKEES VAQKGNDSQA GGRLGLAVRS LTPSERRESG
IDGGLVVEDV AGPAARVGIQ PGDVILSLNG TPITSADQLR ALVAKSGKQV ALLVQRDEAR
IFIPLDLG