| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5517 |
|---|
| Symbol | fumC |
|---|
| ID | 3614387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2313701 |
|---|
| End bp | 2315107 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637694942 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_299706 |
|---|
| Protein GI | 73539339 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.985388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAC CGTCTTCCTC CGCCACCCGC ATCGAAAAAG ACAGTCTCGG CGATGTGCCA
GTCCCCGCCG ACCACTTGTG GGGGGCGCAG ACCGAACGCT CGCGCCAGAA TTTCCGCATC
GGCAATGAAA AGATGCCGCC GGCGCTGATT GAAGCGTTTG CCATCCTCAA GCTGTGTGCC
GCGCGCGCCA ACCGCGAGCT TGACGTGCTG CCACAGGAAT TGGCAGGCGC CATCGAGCAA
GCAGCAAGCG AAGTGATCGA AGGCCGCTGG CCCGATGAAT TCCCGCTTTC GGTGTGGCAG
ACCGGCTCTG GCACGCAGAC CAACATGAAC CTCAACGAGG TCATCGCCAA CCGCGCCATC
CAGCTGCTTG GCGGCCAGGT CGGCAGCAAG AAGCCCGTGC ACCCGAACGA CCACGTCAAC
GCGAGCCAGT CGTCCAACGA CAGCTTCCCG ACGGCCATGC ACATCGCCGC CACGCGCGCG
ATCCAGCAGA AGCTGCTGCC CGCGCTCGAG ACGCTGCAGC AGACGTTCGC GCGCAAGGTC
GATGCGTTCG CCGACATCGT CAAGGTCGGG CGCACGCACC TGCAGGATGC CGTGCCGCTG
ACGCTCGGCC AGGAGTTCTC TGGCTATATG ACGCAGGTCG CCGATGCCCA ATCGCGGTTG
CAGCAGGCCA TGCTTCGCGC GATGCCTGTC GCGCAGGGCG GCACGGCGGT GGGCACCGGC
CTGAACGCGC CGCCGGGATT CGCCGCCGCA TTCGCGCGCG CGCTGGCCGA CTACACCGGC
CTGCCATTCG AGCCCGCACC GAACCGCTAT GCGCTGCAGG CCGCCCACGA TGCGCTGGCC
GACCTGTCCG GCGCCCTCAA TACGACGGCC TCATCGTTCC TGAAGATCGC GCGCGATTTC
ATGCTGCTGG GCTCGGGCCC GCGCGCCGGC TTTGCCGAAC TGCAGCTTCC GGCCAACGAA
CCGGGTTCGT CGATCATGCC GGGCAAGGTC AATCCGACGC AGGCGGAAGC GCTCGCCATG
GTCTGCTGCC GCGTGATCGG AAACCACACC ACGGTCACGC TGGCGAATGC GCTCGGCACG
CTCGAACTCA ATGCGTACAA GCCGGTGATC GTCTACAGCC TGCTGCAGTC GGTGACACTG
CTTGCGGATG CCGCATCGAG CTTCGCCGAA CACATGGTCG AAGGCGTGGA AGCCGACCGC
GAGCGCATTG CCGAACTGCT CGAACGCTCG CTGATGCCGG TAACCGCGCT CAATCCGCAT
ATCGGCTACG ACAAGGCTGC GGAAATCGCC AAGCTGGCCG TCAAGCGCAA CCTGTCGCTG
CGCGAGGCGG CGATTGCTTC GGGTCATGTA ACCGAGGAGC AGTTTGCGCA GTGGATCGAT
CTGAAGGGGA TGACCAAAGA GGTGTAA
|
|---|
| Protein sequence | MSAPSSSATR IEKDSLGDVP VPADHLWGAQ TERSRQNFRI GNEKMPPALI EAFAILKLCA
ARANRELDVL PQELAGAIEQ AASEVIEGRW PDEFPLSVWQ TGSGTQTNMN LNEVIANRAI
QLLGGQVGSK KPVHPNDHVN ASQSSNDSFP TAMHIAATRA IQQKLLPALE TLQQTFARKV
DAFADIVKVG RTHLQDAVPL TLGQEFSGYM TQVADAQSRL QQAMLRAMPV AQGGTAVGTG
LNAPPGFAAA FARALADYTG LPFEPAPNRY ALQAAHDALA DLSGALNTTA SSFLKIARDF
MLLGSGPRAG FAELQLPANE PGSSIMPGKV NPTQAEALAM VCCRVIGNHT TVTLANALGT
LELNAYKPVI VYSLLQSVTL LADAASSFAE HMVEGVEADR ERIAELLERS LMPVTALNPH
IGYDKAAEIA KLAVKRNLSL REAAIASGHV TEEQFAQWID LKGMTKEV
|
|---|
| |