Gene Reut_B5406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5406 
Symbol 
ID3612472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2193427 
End bp2193927 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID637694831 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_299595 
Protein GI73539228 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCCG TGCTGTTTTG CGCGGCGACC CTCTGGACCG ACCTGGCATA TCGACGTGTT 
CCGAACGCCT TGCTGGCGGC GGTGCTGGTG GCTCTCAGCC TGGCATTGCT GACTGGCAAC
GCGCCGGAGC CGGCGATCTC TGCACGGTTG CTCGGCGCAG GGCTTGGCGC GGCTGTCACG
CTACCCGTCT ACGCCCTCGG GCGCATGGCG GCGGGCGATG TCAAGTTCCT GGCCGTGGCA
GGGCTCTTCA CGGGCCCGCA AGGGTTGGTC ACGGTATGGG TTGTCGGCAG CCTGCTCGGA
CTGGTGCATG CGGTGCTGGC GTATGCCTTG GATTCGCGTC CGCTGTCGGC GCTCCGGCAG
CGCATGCCGG CCGCGCTGCG GGTGCACACC GCGATCAGGC CAGCCTCGCA AAGCAGTCGG
CAGTTCAGCA AGGTGCGCGG CATTCCTTAT GCCGCCTACC TTGCAGCAGG CATGCTGGTA
TGGATGGGCA CGCGTGCATG A
 
Protein sequence
MIAVLFCAAT LWTDLAYRRV PNALLAAVLV ALSLALLTGN APEPAISARL LGAGLGAAVT 
LPVYALGRMA AGDVKFLAVA GLFTGPQGLV TVWVVGSLLG LVHAVLAYAL DSRPLSALRQ
RMPAALRVHT AIRPASQSSR QFSKVRGIPY AAYLAAGMLV WMGTRA