| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4843 |
|---|
| Symbol | |
|---|
| ID | 3612786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 1550495 |
|---|
| End bp | 1551802 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637694270 |
|---|
| Product | 3-isopropylmalate dehydratase large subunit |
|---|
| Protein accession | YP_299035 |
|---|
| Protein GI | 73538668 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
|---|
| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG TGTCCGCACA GGCCGTCGCA GCGGCCACGC CCCAGACGCT CGCCCAGAAA
CTGCTGGCCC GCGCATCCGG CCGCGCGCAT GTCACGCCGG GCGAGATCGT CACCTGCCGT
GTCGATCTGG CCATGATGCA TGATTCGGGT GGCCCGCGGC GCGTCAAGCC GCTGCTGGAG
AAGATCGGCG CCCGGGTCTG GGACCCGTCC AGGGTGGTGG TGGTCACAGA CCACTATGTG
CCGGCCCATG ACGCCGACAG CCGCAAGATC GTGCAGATCG CGCGCGAGTG GGTCAGGGAG
GAGGGCGTGG CGCGCTTCCA TGACATGGAG GGCATCTGCC ATGTGGTGGT GCCGCAGAAG
GGCTACCTGC GTCCGGGCAT GATGGCGGTG GGTGGTGACA GCCACTCCTC AACGGGTGGG
GCCTTCGGCA CATACATGTT CGGCATCGGG GCGACAGAGA TGCTCGGCGT ACTGGTGACC
GGCGAGATCT GGGTGCGCGT ACCGCAGACC CTCCGCATGC AATGGCACGG CCGGCTGCGC
CCCGGCGTGT CGGCAAAGGA CATGATGCTG CGCATGTGCA CGCAATTCGG CATGGACGGG
GGCCAGTATC AGGCCGTTGA ATATGCCGGC ACCGCCGTGT CGGCGTTGTC GATGCAGGAG
CGCATGACGC TGTCGAACAT GACCGCGGAG CTGGGCGCCC AGGTCGGCCT GGTGGCGCCC
GACGCGGTGA CGCGCGACTG GCTGCTCGAC GCCGGCGTGG AGCCATCGGA GATTGACGTC
GACCGCTGGC AGTCGGACGC CGGCGCCGCA TGCCTGGCTA CGCACGACTT CGACGCTGCG
TCGCTGGCGC CGCAAGTGTC GCGGCCGCAT ACCCCGGCCG ATGCCAGCGA CGTCGACAGC
CTGGGCAATG TGGCGGTCAA TATCGCATAC ATCGGTGCCT GCACCGGCGC CAAGCTCGAC
GACCTGCGCA TGGCCGCGCA AGTGCTGCGC GGACAGCGCG TGGCGCGCAA TAGCCGGCTG
CTGGTGGCGC CGGCCAGCGC CGCGGACCAG GCGCAGGCCG AGCGCGAGGG CACGCTGGGC
GCGCTGGTGG CGGCCGGCGC CGAGCTTCTG CCAAACGCTT GCGGCGCGTG CGCTGGCTAT
GGCGAGCACC GCTTTGGCGA GGACACCGTG GTGATCAGTA CCACTGCGCG CAATTTCAAG
GGACGCATGG GCGCCGCATC GTCGCAGGTT TATCTCGGTT CGCCCTACAC GGTGGCCGCG
TCTGCAATTG CCGGCCGAAT CGCCGATCCA CGGGGGATGC TGTCATGA
|
|---|
| Protein sequence | MAQVSAQAVA AATPQTLAQK LLARASGRAH VTPGEIVTCR VDLAMMHDSG GPRRVKPLLE
KIGARVWDPS RVVVVTDHYV PAHDADSRKI VQIAREWVRE EGVARFHDME GICHVVVPQK
GYLRPGMMAV GGDSHSSTGG AFGTYMFGIG ATEMLGVLVT GEIWVRVPQT LRMQWHGRLR
PGVSAKDMML RMCTQFGMDG GQYQAVEYAG TAVSALSMQE RMTLSNMTAE LGAQVGLVAP
DAVTRDWLLD AGVEPSEIDV DRWQSDAGAA CLATHDFDAA SLAPQVSRPH TPADASDVDS
LGNVAVNIAY IGACTGAKLD DLRMAAQVLR GQRVARNSRL LVAPASAADQ AQAEREGTLG
ALVAAGAELL PNACGACAGY GEHRFGEDTV VISTTARNFK GRMGAASSQV YLGSPYTVAA
SAIAGRIADP RGMLS
|
|---|
| |