| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3752 |
|---|
| Symbol | |
|---|
| ID | 3613844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 348008 |
|---|
| End bp | 349549 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637693187 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_297954 |
|---|
| Protein GI | 73537587 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.840218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCA AGCTGACGCC CCCCATGTGG GACCAGCTCT TCCAGCAGCA CGCCCACTCC
GGCCTGAGCC TGCAAGGCAA GATCCGCCAG ATGCTGGTCT CCGCGATCCT GGATGAACAG
CTCCCGCAGG GCGTCCCGCT GCCGAGCAGC CGCGAGATGT CCGCGCAGCT GCGCGTGGCC
CGCAATACGG TGGTACTGGC CTACCAGCAG CTCGTGGACG AGGGCTATCT GATCTCCCGC
GAGCGCAGCG GCTATTTCGT CAATCCGGAC ATCCTGGGCA CGCGCGTCAG CGGCGTGGCA
TCGCTGCGCG GCACGCCGCA ACCCGACACG CACGGCAGCG CCCGTCCCGA CTGGGACAGG
CGTTTCGTGT TCCGCCCGAC CCACCAGCGC AATATCGTCA AGCGCCACAA CTGGCGCGAT
TACCCGTATC CGTTCATCTA CGGTCAGTAC GATCCCGTCC TCTTCCCCAC GGCCGACTGG
CGCGAGTGCT GCCTGAAGGC ACTGAGCGTG CTCGATATCC ACGAGTGGGC GCAGGACATG
ATCGTGCGCG ACGACGAATC GCTCGTGCAG CAGATCCGCA CGCGCGTGTT GCCGCGCCGC
GGCGTGTGGG CCGGCGCGGA CGAGATCGTG ATTACCGTGG GCGCACAGCA GGCGCTCTAC
CTGCTGTCCG ATTTGCTGGC TAGCCCAGAT ACACCAGTCG GCATCGAGGA ACCGGGCTAC
CCGGACGCGC GCAATATCTT CGGCCGCCAT ACCTCGAAGC TGATTCCACT GCCGATCGAC
GCCGAAGGCG TGATTCCCTC CGATGCGCTG CGCGCATGCG ACTACGTCTA CGTCACGCCA
AGCCACCAGT GCCCCACCAC GGTCACCATG CCGCTGGCGC GCCGGCAGGC GCTGCTGCGG
CAAGCGGAAG AGGCGGATTT CGTGCTGATC GAAGACGACT ACGAAAGCGA GAGCCGCTTC
GAAGGCGACC CGACGCCGAC GCTGAAAAGC CTGGACCGCA ACAACCGCGT GATCTACGTC
GGCAGCCTGT CCAAGAGCCT CGCACCGGGG CTGCGCATCG GCTACATCGT CGGCCCCGCC
GAACTGATTG CCGAACTGCG CGGCGCGCGC CGGCTGATGT TGCGGCATCC GTCCGCGTAT
ATCCAGCGCG CGTTCTCGCT GTTCCTGTCG CTGGGCCACT ATGACGCGCA TCTGCGGCGC
CTGTCCGCCG CGCACCGGGC GCGCGCCGAG ACCGTGCTGG CCGCGCTGGC CGCCCATATG
CCCGAGTTCC GCCCGGTGCC AATCGCCGGC GGCGCGTCGT GCTGGATCGA AGGGCCGGCG
TGGCTCGATG CCGATGCGCT GGCGCGCCTC GCCGAACTGC AGGGTGTGCT GATCGAGCCC
GGCAGCGTGT TCTTCATGGG CGAGCCAGCG CCACGCAACG GCTTCCGGCT CGGCTATTCG
TCGATCGCGC CGGAACGTAT CGAGCCCGGC ATACGCGTGC TAGCCAGCGT GGCACGCGAA
CTGCACGCAG CTATCCCCGC ACGGGGCGCA TCGGCGGCCT GA
|
|---|
| Protein sequence | MTSKLTPPMW DQLFQQHAHS GLSLQGKIRQ MLVSAILDEQ LPQGVPLPSS REMSAQLRVA
RNTVVLAYQQ LVDEGYLISR ERSGYFVNPD ILGTRVSGVA SLRGTPQPDT HGSARPDWDR
RFVFRPTHQR NIVKRHNWRD YPYPFIYGQY DPVLFPTADW RECCLKALSV LDIHEWAQDM
IVRDDESLVQ QIRTRVLPRR GVWAGADEIV ITVGAQQALY LLSDLLASPD TPVGIEEPGY
PDARNIFGRH TSKLIPLPID AEGVIPSDAL RACDYVYVTP SHQCPTTVTM PLARRQALLR
QAEEADFVLI EDDYESESRF EGDPTPTLKS LDRNNRVIYV GSLSKSLAPG LRIGYIVGPA
ELIAELRGAR RLMLRHPSAY IQRAFSLFLS LGHYDAHLRR LSAAHRARAE TVLAALAAHM
PEFRPVPIAG GASCWIEGPA WLDADALARL AELQGVLIEP GSVFFMGEPA PRNGFRLGYS
SIAPERIEPG IRVLASVARE LHAAIPARGA SAA
|
|---|
| |