| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2146 |
|---|
| Symbol | |
|---|
| ID | 3611827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2367058 |
|---|
| End bp | 2368704 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637691544 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_296354 |
|---|
| Protein GI | 73541834 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.714006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAA ACCTGATCGT ATCGACGCCC TCGGCGTACT CGTATCCGCT GCTGGTCAAG
CAGCTGCTGA TTCACTCGAT GAGCCTCTAT GGCGACCAGG AAATCAGCTA CCGCGGCGAA
ATGCGCTACA CGTACCGCGA TTTCCGTCGT CGCGTCGGCC AGCTTGCCTC GACGCTCGCA
TCGCTCGGCG CCAAGCATGG TTCCACGGTG GCCGTGATGG ACTGGGACAG CCATCGCTAT
CTCGAGTGCT ACTTCGGCGT GCCGATGATG GGCGCGACGC TGTTCACCGT GAACGTGCGC
CTGTCGCCGC AGCAGATCCT GTACACGCTC AACGATGCTG ACGCGGACAT CGTGCTGGTC
CATCCGGATT TCGTTCCGGT GCTCGACCAG ATCCGCAACG AGCTCACCTG CAATCCGCGC
TTCGTGCTGC TGGCCGACGG CCACGCTGCG CCGCAGACGG AACTGCAGTT CGCGGGCGAG
TATGAAGCGC TGCTGGCAGA TGCCTCGCCG GATTTCGACT TTCCCGAGTT CGACGAGAAC
ACCAAAGCGG CAACGTTCTA CACCACCGGT ACCACCGGCG ACCCGAAGGG CGTTTGCTAC
AGTCATCGCG ACATCGTGCT GCACACGTTG TCCACGTCGG CCAGCCTCTG CTCGCCGCGC
GACGGGCAGC GCATGCATCG CGAAGACGTG TACATGCCGA TCACGCCGAT GTTCCACGTG
CTGGCCTGGG GCATACCGTA CCTGGCCGTC ACGCTGGGTT TGCGCACCGT GCTGCCTGGC
CGCTACGCGC CGGACGTGCT GCTGAAGCTG CGTGAAGCGG AAAAGGTCAC GTTCTCGCAC
TGCGTGCCGA CTATCCTGCA GATGCTGCTG CAGTCCTCGC AGGACAGTGG GCAAGATCTC
TCCGGCTGGA AGATCATCAT CGGCGGCTCC GCACTGCCGC CGTCACTGTG CGAAGCAGCG
CTTGATCGCG GCATCGACAT CTTCGCCGGA TATGGCATGT CCGAGACCGG CCCCATCGTC
TCGCTGGCAC AGCTGCCGCC CAATGTGAAG CCGGCAAATC GCGCCGACGA AGTTCGCATG
CGCTGCTCCA CGGGCCGACC GGTGGTGATG GCGGACTTCC GCATCGTCAG CGAAGACATG
CAGGACCTGC CGCGCGACGG CAAGAACCGT GGCGAGATCG TGCTGCGTGC GCCTTACCTG
ACCCAGTCGT ACTTCAAGAA GCCTGGCGCT TCGGAAGAGT TGTGGGCGGG CGGCTATCTG
CATACGCAGG ACGTCGCGGT CATGGGCGAA GACGGCTTCG TGCAGATCGT CGATCGCATC
AAGGACGTCA TCAAGACCGG TGGCGAATGG GTGTCGTCGA TCGAAGTCGA GAATCTCATT
TCCGAAGTGC CGGGCGTTCA GGAATGCGCG GTGATCGGCG TACCGGATGA CAAGTGGGGC
GAGCGGCCGA TGGCCTTCGT CGTCCGCAAG GCCGGCGCGG AAGTCGGTGC GGACAGCATC
CGCGAAAAGC TGCTGGGACA TGTCGATTCG CGTCGCATCA GCAAATACGC GGTGCCCGAA
GCGGAACGTA TCGCCTTCGT GGCGGAGATA CCGAAGACCA GTGTCGGGAA GATCAATAAG
AAGCAGCTGC GGGAAAAGGC AGCCTGA
|
|---|
| Protein sequence | MQQNLIVSTP SAYSYPLLVK QLLIHSMSLY GDQEISYRGE MRYTYRDFRR RVGQLASTLA
SLGAKHGSTV AVMDWDSHRY LECYFGVPMM GATLFTVNVR LSPQQILYTL NDADADIVLV
HPDFVPVLDQ IRNELTCNPR FVLLADGHAA PQTELQFAGE YEALLADASP DFDFPEFDEN
TKAATFYTTG TTGDPKGVCY SHRDIVLHTL STSASLCSPR DGQRMHREDV YMPITPMFHV
LAWGIPYLAV TLGLRTVLPG RYAPDVLLKL REAEKVTFSH CVPTILQMLL QSSQDSGQDL
SGWKIIIGGS ALPPSLCEAA LDRGIDIFAG YGMSETGPIV SLAQLPPNVK PANRADEVRM
RCSTGRPVVM ADFRIVSEDM QDLPRDGKNR GEIVLRAPYL TQSYFKKPGA SEELWAGGYL
HTQDVAVMGE DGFVQIVDRI KDVIKTGGEW VSSIEVENLI SEVPGVQECA VIGVPDDKWG
ERPMAFVVRK AGAEVGADSI REKLLGHVDS RRISKYAVPE AERIAFVAEI PKTSVGKINK
KQLREKAA
|
|---|
| |