| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1817 |
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| Symbol | |
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| ID | 3609859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 1989351 |
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| End bp | 1990568 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637691207 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_296026 |
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| Protein GI | 73541506 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00656691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGC CCACACTGCG GGAAACCGCT GACAATGCAC CGCCTGAAAC TGCCTGCCCG
CCACCTGCCG AGCGCGGGAG GGGGCGCCTC ATTCTGGCTG CCGCGGCCGT CCTCGCCTGT
GCGCTGGCCG CCGGGATCGT CCCCAGGCTG CACGCGCACG CTGCACTGGC CCAGCGCACC
GCGCAGACGA TGGTGCCGGC CGTCAGGATC GTGCGCCCCG GGCATGCGGC GGCGATGCGC
GAAATCGTCC TGCCCGGAGA TGTGCGGGCC TATCAGGATG CAGCGGTCTA TGCGCGCGTC
AACGGCTATT TGCGACGCTG GTATGCGGAC CTCGGTACGC CGGTGAAGAA GGGCCAGTTG
CTGGCCGAGA TCGACGCGCC GGAAGTGGCT GACCAGTTGC GCCAGGCACG CGCCGACGAA
GCGACCGCCG CCGCCAACTA CGCGCTGGCG CGGAGCACTG CGGACCGCTG GAAGGACCTG
CAGGCGTCCA ACTCCGTCGC GCAGCAAGAG ACCGACCAGA AGATCGCCGA CATGCAGGCC
AAGGCTGCCG TACTGGCATC GGCGCGCTCG AATACGTCGC GCCTCGCGCA ACTTGCGTCC
TACACGGAGA TTCGCGCGCC ATTCGACGGG GTGATTACCG CCAGGAATGT CGATACCGGT
GCCTTGGTCG ATGCCGGCAG CGCCCCCGGC CAGGGCCGTG AACTGTTCCA CATCTCGGCG
GGCGGCACGC TGCGGGTCTA CATACAGCTT CCCCAGGACG CCAGTGCGAT GGTGGGCCCG
GACATGCAGG CATGGCTGAC GCTGCCGCAA TCGCCAGGCG AGCGGTTTGC CGCCACGGTG
ACGCGCAATG CCGGTGCCTT CGATGCCGCC ACGCGCAGCC TGCGGGTCGA ACTCGAGGTC
GACAGCCACG GCGGCCGCAT CCTGCCGGGC GCCTATGCGG AGGTGCACCT GAGCACGAAT
GCGGACACTG CTGGCTTCGA CCTGCCGGCC AGCACGCTGG CGTTCCGCCC CGCAGGTCCG
AGCGTCGCCG TGGTCGGCAA GGATGGGCGC GTGGAACTTC GCAACATCAC GCTTGGCCGT
GACTTCGGTA CCCACGTGGA AGTGCTGGGC GGGCTGCAAG GCACGGAGCA GGTCATCGTC
AACCCGGGTG ACGGCCTGAT GGCTGGCACC CCGGTACGTG TCGTTGCCGA CCAGGCCGGT
GCGGCCCGGT CGTCCTGA
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| Protein sequence | MTLPTLRETA DNAPPETACP PPAERGRGRL ILAAAAVLAC ALAAGIVPRL HAHAALAQRT
AQTMVPAVRI VRPGHAAAMR EIVLPGDVRA YQDAAVYARV NGYLRRWYAD LGTPVKKGQL
LAEIDAPEVA DQLRQARADE ATAAANYALA RSTADRWKDL QASNSVAQQE TDQKIADMQA
KAAVLASARS NTSRLAQLAS YTEIRAPFDG VITARNVDTG ALVDAGSAPG QGRELFHISA
GGTLRVYIQL PQDASAMVGP DMQAWLTLPQ SPGERFAATV TRNAGAFDAA TRSLRVELEV
DSHGGRILPG AYAEVHLSTN ADTAGFDLPA STLAFRPAGP SVAVVGKDGR VELRNITLGR
DFGTHVEVLG GLQGTEQVIV NPGDGLMAGT PVRVVADQAG AARSS
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