| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1224 |
|---|
| Symbol | |
|---|
| ID | 3609388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1307999 |
|---|
| End bp | 1309087 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637690609 |
|---|
| Product | secretion protein HlyD |
|---|
| Protein accession | YP_295439 |
|---|
| Protein GI | 73540919 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.343602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC GCTGGCTTTT TCTGATATCG GCGTTGGGCG CGCTGGTCGG CGTGGCCGCC
GCGATCATTT TTGCCCAGCA GAAGCCGCCG CTTCCGCCGG TGTTCCAGCC GGCCGCCAAT
CCCTATCGCA GCGGCATTTA TGCAAACGGT ATCGTGGAAA GCGAGCAGGA CAGCGGCGCC
AACGTCAACG TCTACCCCGA GGTGGCTGGA ACCGTACTGC GTATCGCCGT GCATGAAGGC
CAGACCGTCA AACGCGGCGA TGAATTGCTG GCCATTGACG ACTCGGTACA GCGCGCGCTG
GCAGCGCAAC AGAGTGCGCA GGCAGACGCC GCAGAGGCAC AGCTCGCGCA ATTGCTCGCT
CAGCCGCGAA AGGAGACGCT TGAGGTCGCC AAGGCGCAGG CTGACGCCGC AGCGGCAAGC
CTCAAGACCG TGGAAGACCA GTATGACAAG CTGCGCAAGT CGCGGGAGTT CGACGCCAGG
TCTGTCAGCC AGGATGCCAT GGACAATGCC GCCAACGCCG TGCATGTCGC GCGCAGCGGC
CTGGTGGTAG CCAGTCGGCA ACTCGCGCTG ACGCGCGCCG GTGCGTGGAC GTTCGACATA
CGCAACCAGG AGAAGCAGCG CGATGCGCTG CGCAAGGCGG CCGACGCGGC GGACGCCTTG
CTGCGCAAGT ACGTCGTGCG CGCGCCGATG GACGGTGTGG TGCTTTCGGT CAATCCGGCG
GTGGGTGCCT ATGTATCGCC GCAAGGGACG TACAACACTT ATACGCAGGG AAGCCAGCCG
GTTGCCGTGC TGAGCAGCCA GCAGGACTGG CTCGGGGTCC GCGTCTATGT CGACGAGATT
CTCGTTCACC GGCTGAAACC TGGCCGCGGC ATGCAGGCCC GCATGTTCGT GCGCGGCACG
GACACCAGCA TCGTGCTGGA GTTCGTCCGG GTGCAGCCGT ACCTGACGCC CAAGATCCAG
CTCTCGGACC AGAGGGCGGA GCGGGTCGAC GTACGCGTAC TGCCGGTAAT CTTCCGCTTC
AGGCCGCCCG CCCAGCCACC GATCTACCCG GGGCAACTGG TCGATGTCTA TCTGGGCGGG
ACACCGTGA
|
|---|
| Protein sequence | MKNRWLFLIS ALGALVGVAA AIIFAQQKPP LPPVFQPAAN PYRSGIYANG IVESEQDSGA
NVNVYPEVAG TVLRIAVHEG QTVKRGDELL AIDDSVQRAL AAQQSAQADA AEAQLAQLLA
QPRKETLEVA KAQADAAAAS LKTVEDQYDK LRKSREFDAR SVSQDAMDNA ANAVHVARSG
LVVASRQLAL TRAGAWTFDI RNQEKQRDAL RKAADAADAL LRKYVVRAPM DGVVLSVNPA
VGAYVSPQGT YNTYTQGSQP VAVLSSQQDW LGVRVYVDEI LVHRLKPGRG MQARMFVRGT
DTSIVLEFVR VQPYLTPKIQ LSDQRAERVD VRVLPVIFRF RPPAQPPIYP GQLVDVYLGG
TP
|
|---|
| |