| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0179 |
|---|
| Symbol | |
|---|
| ID | 3610435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 203391 |
|---|
| End bp | 203990 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637689567 |
|---|
| Product | RNA polymerase sigma factor |
|---|
| Protein accession | YP_294405 |
|---|
| Protein GI | 73539885 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACG ACACCGCCGA CCTTGAAACC CTTCGCCCCC ACCTGCTGCG CTTCGCCCGG
CTGCAATTGC GCGACGAGGC GCTCGCGGAA GACGCGGTGT CCGACACGCT GCTGGCCGTG
CTGGAGCACC CGGAGCGCTT TGCGGGGCAA TCGGCGCTGA AGACCTACCT GGTCGGCATC
CTAAAACACA AGATCATCGA CCTGCTGCGA AGCGGCCGGC GCGAGGTGCG GTTGGCGCTG
GCCACCGACG AGGACGGCGA AACCCAGTCG GAGCAAGACG CCTTTGACGC GCTGTTCACG
CGCAACGGCC ACTACCAGGA CATGCCATCC GACTGGGGCA GCCCCGACCG GACGCTGGAG
CGGCGCGAAT TCTTCGAGAT CCTGCAAGCC TGCGTCGACC GCCTGCCCGC CAAGACGGCG
CGTGTCTTCA TGATGCGCGA GTGGCTGGAA CTCGAGACCG AAGAAATCTG TCAGGATCTG
GAGGTCAGCG CGACCAATGT GTGGGTCATC CTGTACCGCG CCCGCATGCG CCTGCGCGAG
TGCCTGGAAC TGAACTGGTT CGGGCACCAG CCCGGACTGA CTACCGGCAA GACGCGGTGA
|
|---|
| Protein sequence | MPHDTADLET LRPHLLRFAR LQLRDEALAE DAVSDTLLAV LEHPERFAGQ SALKTYLVGI
LKHKIIDLLR SGRREVRLAL ATDEDGETQS EQDAFDALFT RNGHYQDMPS DWGSPDRTLE
RREFFEILQA CVDRLPAKTA RVFMMREWLE LETEEICQDL EVSATNVWVI LYRARMRLRE
CLELNWFGHQ PGLTTGKTR
|
|---|
| |