Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_D6487 |
Symbol | |
ID | 3607911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007337 |
Strand | + |
Start bp | 44652 |
End bp | 45899 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637689345 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_293642 |
Protein GI | 72384289 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.203833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTC AACGTTTCGC TCGCGCCTTC CGGTCCCGCC TCGCCGCCCT GGCGATCGGG GTCGCGACCG CTTCCCTATC GCTGCTGGCT GCCGGCCCCG CGGCCGCGCA GGACAAGCCC ATCAAGATCG GCCTGACCAC CGACCTCACC GGCATCGCGG CCGCCTACGC GCGCTCGCAG GTCAACGGCG TGCAGCTCGC GGTCGACCAG ATCAACGCCA GCGGCGGCCT GCTGGGCCGC AAGCTCGAGG TGCTGGTGCG CGACTCGCAG CTCAAGCCCG ACCTCGGCAC TTCGCACACG CGCGACCTCA TCACGCGCGA GAACGTCGAC TTCCTGATCG GCCCCGACGG CAGCGCGGTC GGCATGACGG TCTCGGCGGT CGCCAAGCAA TACAAGAAGG TGGTCATGAT GACCATCCCG AACTCGCCGC GCATCACGAC CGAGACCTTC CATCCCTACG TCTTCACGGT CGTGCCCTCC GGCGTCATGG AAGCGCGCGC CATGGCCGCC GCCATCGGTC CCGGCAACAA GCGCATCGCC TTCATCGGCG GCGACTACGA GGCCGCGCAC CAGGGGCTGA AGTACTTCAA GGACTGGCTG GCGAAGGTCA ATCCCTCGGC CGAGATCGTC TCCGAGGCCT GGCCGAAGCT CGGCGAGCCC GACTACAGCA GCTACATCAC GAGCCTGATG TCGTCCAAGC CCGACGTCAT CTTCTCGTAC CTCTGGGGCG CCGACCTGAT CGGCTTCGTC AAGCAGGGCA AGCCCTACGG CGTGTTCACC AAGACCAAGG TCGCCAGCCT GGTGTTCCTC GACGACCTGA AAGCGCTCGG CGACGAGATG CCCGATGGCG TGATCGCCCA GATGCGCGCG CCCTTCTTCG CGCTTACGGG TGACCGCATG ACCAAGTTCA CCGAGCAGTT CCGCGCCAAG TACAACGACT ACCCGGCCGA CTGGGCGATC ATGGGCTACG AGGGCATGCA GATCCTCGCG CAGGCGATCA AGAGCGCCAA CTCGCTCGAA TCGGACGCCA TCGTCAAAGC GGTCGAGCAG GTCAAGTACG ACGGTCTGCG CGGTCCGATC AGCTTCCGGG CGCTCGATCA CCAGGGCACG GTCGGCTCCT ACATCGGCAC CGTCGCCAAG AGCGACAAGT ACCCGTTCAA GATCCTGACC AACGTCAAGA CCATCAGCGC CGAATCGATC TGGCCCAGCG AGGCCGAGAT CACGGCCGCG CGCGCGGCCG TCAAGTAG
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Protein sequence | MKIQRFARAF RSRLAALAIG VATASLSLLA AGPAAAQDKP IKIGLTTDLT GIAAAYARSQ VNGVQLAVDQ INASGGLLGR KLEVLVRDSQ LKPDLGTSHT RDLITRENVD FLIGPDGSAV GMTVSAVAKQ YKKVVMMTIP NSPRITTETF HPYVFTVVPS GVMEARAMAA AIGPGNKRIA FIGGDYEAAH QGLKYFKDWL AKVNPSAEIV SEAWPKLGEP DYSSYITSLM SSKPDVIFSY LWGADLIGFV KQGKPYGVFT KTKVASLVFL DDLKALGDEM PDGVIAQMRA PFFALTGDRM TKFTEQFRAK YNDYPADWAI MGYEGMQILA QAIKSANSLE SDAIVKAVEQ VKYDGLRGPI SFRALDHQGT VGSYIGTVAK SDKYPFKILT NVKTISAESI WPSEAEITAA RAAVK
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