Gene PMN2A_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1891 
Symbol 
ID3607303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp546511 
End bp548307 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content33% 
IMG OID637688784 
Productmultidrug ABC transporter 
Protein accessionYP_293082 
Protein GI72383727 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA ATGATTTTCG AAGAATTAAG AAACTTGGAA AGTATTTAAA AAGAGAAAAA 
AAACGTTTAA TTCTCATACT TTTAATATTA ATACCTGTTG CATTAGCTGG TTCGATCCAA
CCACTGCTTG TAGGGCAAGC TATTTCTGTC TTAAGAGGAG AAGATACAAT AGCTTTTTTT
AATAATTTGC CTAAGGAATT AACTATTAAT TTTATAATAG GAATATTATT CATAACAGTA
TTACTTAGGC TTGGATTACA GGGATTTCAG TCATACAATA TTCAGTCTGT AGGCCAGAGA
TTGACGGCAC GTATTAGGAA TGATTTATTT GCTCATTCCA TGTCATTATC TTTGCGTTTT
CACGACAAAA TGCCTGTTGG TAAATTACTT ACAAGATTAA CTAGTGATGT TGATGCATTG
TCAGAAGTGT TTGGTAGTGG AGCTGTTGGT GTTTTGGCTG ACTTTGTAAG TCTTATCGTT
ATATCAATAA CAATGATTTT AATAGAATGG AGGTTAGGTC TTCTCCTTTT GATTGTTCAA
ATACCTGTTA CGTTATTTAT ACTCTGGCTT CAAAAACGTT ATCGAAAACA AAATTATAAA
GTTAGAGAAG AACTTTCCCA ATTAAATGCA AATTTCCAGG AAAATCTGCA AGGCTTAGAA
GTTGTTCAAA TGTTTAGAAG ACAATCATTA AATGGTCAAA ACTTTTTCAA AACTGGAACT
AATTATAAAA ATGCAGTAAA CGGTATAATC TTTTACGATA GTAGCATTTC TGCGTTTATT
GAATGGGTCT CATTAGCTGC AGTGGCCTTA GTTATTTCTC TGGGAGGTTA TATGGTTACA
GCAGGGGCGA TGGGATTAGG AACTTTAACG ACATTTATTC TTTATTCACA AAGACTATTT
GAACCTTTAA GACAGTTAGC AGAAAGATTT ACACAAATAC AGGGAGGGTT AACAGCAGTT
GAGAGAATAG GTGAATTGCT TGAGAAGAAA ATTGAGATTT ATGATCATAT TAACCACAAA
GCTGAAAATA AAGAATCATT AAATTCAAAT AAGACTGTTC TTGGTGAAGT TTTATTTGAA
AATGTAAGTT TTTTTTATAG AGAAGATGAA CCAATAATAA ATGATCTAAG TTTCAAAATT
AAACCAGGCG AGCATGTTGC TCTTGTAGGT CCAACTGGTT CTGGGAAGAC TACTTTAATT
AGGTTATTAT GTAGACTTTA TGAACCTCAG AAGGGAAACA TATATATAGA TGGTCAAAAT
ATTAAAAGTA TCCCTATCGA TTCATTGAGG AAACAACTTG GAGTTGTTCT TCAAGATACT
TTCCTTTTTA GCGGAAATGT TGCAGATAAT CTACGTTTAG ATTCTTCAAT AGATAATCAA
CGCTTAAAAG ATGTATGTAG TGACTTAGGT CTTGATAATT TATTGAGAAA GTTGCCAAAT
GGTTTAGATA CTTATATTCG AGAAAGAGGA GGAAATCTTT CTTCAGGTGA GAGACAGCTT
TTGTCTATAG CAAGAGTTGC AATAAGAGAT CCAAAAATAT TAATCATGGA TGAAGCAACT
GCTTTTATGG ATCCATCTAC TGAGGCAACT TTACAAAGAG ATCTTGATAG ATTATTAGAA
AAAAGGACAG CACTTGTGAT TGCTCATAGA TTGGCAACAA TAGAAGCTTC TGATCGAATC
TTAGTAATGA GAAAAGGAAG TCTTATTGAA GAAGGTACCC ATGAAGAATT GAGGGCTTTA
GGTGGACTTT ATTCGCAACT TTCTGAATTG CAAGAAAAAG GTCTCGCAAC TATCTAA
 
Protein sequence
MAKNDFRRIK KLGKYLKREK KRLILILLIL IPVALAGSIQ PLLVGQAISV LRGEDTIAFF 
NNLPKELTIN FIIGILFITV LLRLGLQGFQ SYNIQSVGQR LTARIRNDLF AHSMSLSLRF
HDKMPVGKLL TRLTSDVDAL SEVFGSGAVG VLADFVSLIV ISITMILIEW RLGLLLLIVQ
IPVTLFILWL QKRYRKQNYK VREELSQLNA NFQENLQGLE VVQMFRRQSL NGQNFFKTGT
NYKNAVNGII FYDSSISAFI EWVSLAAVAL VISLGGYMVT AGAMGLGTLT TFILYSQRLF
EPLRQLAERF TQIQGGLTAV ERIGELLEKK IEIYDHINHK AENKESLNSN KTVLGEVLFE
NVSFFYREDE PIINDLSFKI KPGEHVALVG PTGSGKTTLI RLLCRLYEPQ KGNIYIDGQN
IKSIPIDSLR KQLGVVLQDT FLFSGNVADN LRLDSSIDNQ RLKDVCSDLG LDNLLRKLPN
GLDTYIRERG GNLSSGERQL LSIARVAIRD PKILIMDEAT AFMDPSTEAT LQRDLDRLLE
KRTALVIAHR LATIEASDRI LVMRKGSLIE EGTHEELRAL GGLYSQLSEL QEKGLATI