Gene PMN2A_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1874 
Symbol 
ID3607286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp532758 
End bp534335 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content40% 
IMG OID637688767 
Productlight-independent protochlorophyllide reductase subunit B 
Protein accessionYP_293065 
Protein GI72383710 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01278] light-independent protochlorophyllide reductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA CTCTCTGGAC ATACGAAGGA CCTCCTCATA TCGGAGCGAT GAGGATTGCT 
ACGTCTATGA AAAAATTACA TTATGTTTTA CATGCTCCTC AAGGGGATAC TTACGCTGAC
CTTCTTTTTA CGATGATTGA ACGCCGCGGA AGTAGACCAC CTGTAACTTA TACAACTTTT
CAAGCTAGAG ATTTAGGAGG TGATACAGCA GAACTTGTAA AAGGACATAT AAAAGAAGCC
GTAGACAGAT TTAAGCCAGA GACTCTTTTG GTAGGAGAAA GTTGTACAGC TGAATTAATT
CAAGATCAGC CCGGATCACT AGCAAAAGGT ATGGGTTTTG ATATCCCAAT TGTCAGCCTC
GAATTACCGG CCTATAGCAA AAAGGAAAAC TGGGGTGGAT CTGAGACCTT TTATCAAATC
GTAAGAACTT TACTCAAAGA CCACTCGAAT GAATCCAAGC ATACGTGGCA GGAAGAAAAA
AGAAGACCGA GGGTAAATCT ACTTGGTCCA ACTTTGCTTG GATTTAGATG TAGGGATGAT
GTTTTGGAAA TACAAAAACT ACTTGGTCAG TACGGGATAG ACGTCAATGT TGTGGCGCCA
CTAGGAGCAT CACCTGCAGA TATATTGCGA ATCCCCAATG CTGATGTAAA TGTTTGCCTT
TATCCAGAAA TAGCGGAATC AACTTGTATT TGGCTTGAAA GAAATTTAAA TATTCCTTTT
ACAACAACAG TTCCGCTTGG TGTTGGGGCT ACTCAGGATT TTCTTAAGGA ATTACACAAA
GTGTTAGAGA TGGAAATCCC TCAATCAGTA AACGAATCTA ATAATTCGAA ATTAACCTGG
TACTCGAATT CAGTGGATTC GAATTACCTA ACAGGTAAAA GAGTCTTTAT TTTTGGAGAC
GGAACACACG CTCTTGCTGC AGCAAGAATT GCTAATGAGG AGCTTGGTTT TAAAGTTGTA
GGTCTAGGAA CTTATAGTCG AGAAATGGCT AGGAAAGTTC GTCCAGCCGC TAAGGCACTT
GGTTTAGAGG CATTGATAAC CAATGACTAC TTAGAAGTAG AAGATGCGAT AAAAGAAACA
TCTCCAGAAC TAGTCCTTGG CACACAAATG GAGCGACATA GTGCAAAAAG ACTTGGTATC
CCATGCGCTG TGATCAGTAC ACCAATGCAT GTGCAGGATG TACCTGCTCG ATATAGCCCT
CAAATGGGAT GGGAGGGTGC AAATGTCATT TTTGATGACT GGGTTCATCC ATTAATGATG
GGACTGGAGG AACATTTAAT TGGAATGTTT AAGCATGACT TCGAATTTGT TGATGGCCAC
CAAAGTCATC TAGGACATTT AGGTGGAAAA GGAACTCAAA ATACAAATAA AGAGGCTATA
AAAACAAACT TACAAGATTC AGTAATTACA GATAGCGACC CTATCTGGAC ACATGAAGGT
GAAAAAGAAC TTTCGAAAAT CCCATTTTTT GTAAGAGGTA AGGTAAGAAG AAATACAGAG
AATTATGCTC GCCAAGCTGG ATGTAGAGAA ATCAACGAAG AAACTCTATA TGACGCTAAG
GCTCATTATA AAGCCTAA
 
Protein sequence
MELTLWTYEG PPHIGAMRIA TSMKKLHYVL HAPQGDTYAD LLFTMIERRG SRPPVTYTTF 
QARDLGGDTA ELVKGHIKEA VDRFKPETLL VGESCTAELI QDQPGSLAKG MGFDIPIVSL
ELPAYSKKEN WGGSETFYQI VRTLLKDHSN ESKHTWQEEK RRPRVNLLGP TLLGFRCRDD
VLEIQKLLGQ YGIDVNVVAP LGASPADILR IPNADVNVCL YPEIAESTCI WLERNLNIPF
TTTVPLGVGA TQDFLKELHK VLEMEIPQSV NESNNSKLTW YSNSVDSNYL TGKRVFIFGD
GTHALAAARI ANEELGFKVV GLGTYSREMA RKVRPAAKAL GLEALITNDY LEVEDAIKET
SPELVLGTQM ERHSAKRLGI PCAVISTPMH VQDVPARYSP QMGWEGANVI FDDWVHPLMM
GLEEHLIGMF KHDFEFVDGH QSHLGHLGGK GTQNTNKEAI KTNLQDSVIT DSDPIWTHEG
EKELSKIPFF VRGKVRRNTE NYARQAGCRE INEETLYDAK AHYKA