| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1736 |
|---|
| Symbol | |
|---|
| ID | 3607146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 401403 |
|---|
| End bp | 402122 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637688627 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_292927 |
|---|
| Protein GI | 72383572 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA AGCTTCATTT TGTTTCGCCT GAGACAGGGC CTAATAGCAA CTTAGATCTA
ACCCCTCAAC TTGCACAATC TTCTTCCGCT TTTCTTTTTG AACCTAAAAA TATTGTGCCA
TTTGAGACTG CCTTAGGTTG GCAGAAGAAT TTTCAAAAAA ACCTTATTGA GCAACCGTTC
TCACCCCAAG CAGTATGGCT ACTCGAACAT TTTTCTTGTT TCACAATGGG TAGAGGTAGC
GATAAAAAAA ATTTGTTGTT CGAAGAAAAT AATTCTCCAT TGCCAGTTTT TAGTATTGAG
AGAGGAGGTG AAGTTACGCA TCACATGCCT GGGCAGATCG TTGGATACCT AGTTTTAAAT
TTAAGTCTTC ACAAAAAAGA CTTATCTTGG TATTTGAGAG AATTGGAGCA AGTGCTGATT
GATGTTCTTG ACTTGTTGGG AATGGAGGGG AAGAGGGTAG ATGGCTTAAC AGGAGTTTGG
TGTGAAGATA AAAAGGTTGG TTCAATAGGA ATTGGTTGCA AGAGATGGGT GACTCAGCAT
GGGTTTTCAC TAAATGTAGA TTGTGATCTA ATTGGTTTTG AAAAGATAAT TCCTTGTGGA
CTAGATAAAG TGAAAGTAGG GAAATTGAGT GATTGGATAC CTGGCATCAA AGTCTGTGAC
GTTACGCCTC TTTTAAGGGA ATCTGTTAAA AGACGTTTTA AATTGAACTG GGAAAAATAA
|
|---|
| Protein sequence | MDKKLHFVSP ETGPNSNLDL TPQLAQSSSA FLFEPKNIVP FETALGWQKN FQKNLIEQPF
SPQAVWLLEH FSCFTMGRGS DKKNLLFEEN NSPLPVFSIE RGGEVTHHMP GQIVGYLVLN
LSLHKKDLSW YLRELEQVLI DVLDLLGMEG KRVDGLTGVW CEDKKVGSIG IGCKRWVTQH
GFSLNVDCDL IGFEKIIPCG LDKVKVGKLS DWIPGIKVCD VTPLLRESVK RRFKLNWEK
|
|---|
| |