Gene PMN2A_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1727 
Symbol 
ID3607137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp394610 
End bp395524 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content36% 
IMG OID637688618 
Productcobalt ABC transporter permease 
Protein accessionYP_292918 
Protein GI72383563 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.856144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTGGC TAAAAAAGAT TCCAATTGGT CAATATGTCT CTGGCAAATC TAGCTGGCTT 
CGTGGTATTG ATCCTCGAAT TAAACTCTCT TGGATCTTGT TGTTTTTGCT GACTCCGATT
TTAGCTAATT CTCTTTGGAG GATTTCAATA GCTTTTGTTC TTTTATTGAT TACATTTCTT
AGTTTCCTCC CTCCACGTAT TTGGTGGCGA TCTCTAGTAT TTTTATTGGC TTTCTCTTTG
GTTATTGGAT CCTTATCGAT TGTTTTACCT GCTAGTCAAT CATCCTTTGC ATTACCTATA
AGAGCATCTG ATGAAATACC AGGAGCAATT ATTTTGACTC GATCATGGGA GATTTTTAGA
TTGGGGCCTA TTGACTTCGG GGGAATTTCA TTAGGACCAT TAATTATCGA TCGCCGCTCG
GCTGAATTAG GTATTAAAAC TTCAACCTTG ATTTTTACTG TTATTCACAG TGTGAATTTG
ATATTAATTA CAACACCTCC TGAAGACCTT GTATGGGCAA TAAGGTGGTT TTTTGCACCT
TTGACTCTAT TGGGATTTCC TTTAGAAAAA CTATCTTTTC AACTGCTTTT GGCTTTACGA
TTTTTACCTT TAGTTCAAGA GGAACTCCAA AACCTCTTTC GCTCAATTGG TGTGAGGGCA
ATTGATTTTA AAAAATTGGG ACTTAAAAGT TCATTGGGGT TATTTGTGAC TTTAGGGGAA
AGACTATTGT CAAATATTTT GCTTAGAGCA GAACAGGGGG CTGATTCATT AATGTCAAGG
CAGGGGCTTT GGCTATCTTC AGAGCAATTA AGACCAAACA TAGTTATTAA TCCTAAATAT
TTGTGGATTA ACATAAGTTC GATTTTTTTG CTTTTGATAG CCATTAGCTT ACGTTGTCTG
TATGGTACGT CTTAA
 
Protein sequence
MDWLKKIPIG QYVSGKSSWL RGIDPRIKLS WILLFLLTPI LANSLWRISI AFVLLLITFL 
SFLPPRIWWR SLVFLLAFSL VIGSLSIVLP ASQSSFALPI RASDEIPGAI ILTRSWEIFR
LGPIDFGGIS LGPLIIDRRS AELGIKTSTL IFTVIHSVNL ILITTPPEDL VWAIRWFFAP
LTLLGFPLEK LSFQLLLALR FLPLVQEELQ NLFRSIGVRA IDFKKLGLKS SLGLFVTLGE
RLLSNILLRA EQGADSLMSR QGLWLSSEQL RPNIVINPKY LWINISSIFL LLIAISLRCL
YGTS