Gene PMN2A_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1690 
SymbolnrdR 
ID3607092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp357585 
End bp358064 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content32% 
IMG OID637688573 
Producttranscriptional regulator NrdR 
Protein accessionYP_292881 
Protein GI72383526 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.137573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTGCC CATCTTGTCA AAATACAGAC AGTCGAGTTC TTGAATCTCG TTCGGCTGAT 
TCTGGAAGAA GCGTAAGAAG AAGAAGGGAG TGCTTAAATT GCGACTTCCG ATTTACTACT 
TATGAAAGAG TAGAAACAAC ACCAATTAAT GTTTTAAAAA GAAGCGGAGC AAAAGAATTA 
TTTAATCGAA GTAAAATAAT TAATGGCCTA AACAGAGCCT GTGAAAAAAC ACTTATACAT 
GGATCTAAAA TTGAATTTAT TGTTGACGAA ATAGAGCTAG AACTCCATCA AGGAGTTTGT 
AAAGAGATCA AATCAATTGA AATTGGAGAA ATGGTTCTTA CACATTTAAA AGATATTAAT 
GAAGTTGCTT ATATCAGATT TGCATCTGTT TATAGACAGT TTAATGGAAT TAATGATTTC 
ATGAAAACCC TTGAAGCACT AAAACCAATA AAAAAAGAAC AATTGGCATC AGTTATTTAA
 
Protein sequence
MQCPSCQNTD SRVLESRSAD SGRSVRRRRE CLNCDFRFTT YERVETTPIN VLKRSGAKEL 
FNRSKIINGL NRACEKTLIH GSKIEFIVDE IELELHQGVC KEIKSIEIGE MVLTHLKDIN 
EVAYIRFASV YRQFNGINDF MKTLEALKPI KKEQLASVI