| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1637 |
|---|
| Symbol | |
|---|
| ID | 3607037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 305931 |
|---|
| End bp | 307061 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637688517 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_292828 |
|---|
| Protein GI | 72383473 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGC CCTTATTCGA TTTCCAAATA AAAAGTAGAT GCAAAACGAC ATTAGCTCGT
GTCTGTTCTT TTAAAACTCC AAATGGAATT GTAAATACTC CAAAATTCAT GCCTGTTGGG
ACTTTAGGAA CAGTCAAAGG AGTTACATCT CAGCAACTTG AGAAAACAGG GGCTGAAATG
ATTCTTGCAA ATACTTTTCA TCTTCATCTT CAACCAGGAG AAAAAATAGT TCAAGATGCA
GGAGGACTAC ATAAATTTAT GAGTTGGAAT AAACCAATTC TTACTGACTC AGGAGGCTTT
CAAGTATTTA GTTTGGCAAA ATTAAATAAA ATAGATGATG AAGGAGTCTC GTTTCAAAGT
CCAAGAGATG GTAAACATAT TTATTTGACT CCTGAAAAAG CTATTGAAAT TCAAATGGCT
TTAGGGTCAG ATGTGGCAAT GGCTTTTGAT CAATGCCCCC CTTACCCAGC AAGCGAATCA
GACGTTGAGG AGGCTTGCAA GAGAACCCAT CATTGGTTGG AGAGATGTTT GAATGCTCAT
AAGAAAAATG ATCAAGCAGT TTTTGGAATA GTTCAAGGTG GTTGCTTCCC TCATTTAAGG
GAATTAAGTG CAAAAATTGT CTCAGGATTC GGTTTACCAG GAATTGCTAT TGGAGGAGTA
AGCGTAGGTG AACCCATAAA TCAAATGCAC AAAATCGTAC GAGAAACCTG CCCTTTATTA
CCTCAAGATC GACCTAGATA CTTAATGGGA ATTGGAACCT TAAGAGAAAT GGCCATTGCA
GTAGCAAATG GAGTTGACAT GTTCGATTGT GTAATTCCTA CGCGGCTGGG AAGGCATGGA
AGCGCATTAG TTAATGGAGA AACATGGAAT CTAAGGAATT CACGTTTTAA AGACGATTAC
AGCTCATTAG ACCCAACATG TACTTGTGAA GCTTGTACGG GATATTCAAG AGCATATATT
CATCATTTAA TTCGCAATAA AGAATTACTA GGTCTTACAC TTTTGAGTAT CCATAACCTT
ACGCATTTGA TCCGTTTTAC AGGTGCTATG AGGCAAGCAA TTACTGAAGG TTGTTTTTCA
GAGGATTTCG CTCCGTGGCA GAGTGACTCT AAAGCGCGTC ATACGTGGTA G
|
|---|
| Protein sequence | MKKPLFDFQI KSRCKTTLAR VCSFKTPNGI VNTPKFMPVG TLGTVKGVTS QQLEKTGAEM
ILANTFHLHL QPGEKIVQDA GGLHKFMSWN KPILTDSGGF QVFSLAKLNK IDDEGVSFQS
PRDGKHIYLT PEKAIEIQMA LGSDVAMAFD QCPPYPASES DVEEACKRTH HWLERCLNAH
KKNDQAVFGI VQGGCFPHLR ELSAKIVSGF GLPGIAIGGV SVGEPINQMH KIVRETCPLL
PQDRPRYLMG IGTLREMAIA VANGVDMFDC VIPTRLGRHG SALVNGETWN LRNSRFKDDY
SSLDPTCTCE ACTGYSRAYI HHLIRNKELL GLTLLSIHNL THLIRFTGAM RQAITEGCFS
EDFAPWQSDS KARHTW
|
|---|
| |