| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1627 |
|---|
| Symbol | |
|---|
| ID | 3607027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 294881 |
|---|
| End bp | 296488 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637688507 |
|---|
| Product | virulence factor MVIN-like |
|---|
| Protein accession | YP_292818 |
|---|
| Protein GI | 72383463 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAT CAATCAAAGA AATTGCTTTC TTCGTAAGTT TAGGAACTTT ATTGAGCAAA
TTTGGAGGGT TGGCTAGGCA ATTAGTTATT GCTGGTGCTT TTGGAATTAA TGCTGCATAT
GATGCATATA ATTATGCTTA TATTATACCT GGTTTTTTCT TAGTCCTGTT AGGGGGTATT
AATGGTCCAT TACATAACTC AATGGTTACA CTATTGGCAG ATAAAAATAA AGTTGAGAGT
AGATTATTTA TAAGTTCAAT CAATAATATT TTATCTATAA TACTATTAAT TATAAGTTTA
TTTATTTTCT TTTCATCTGA TTTTTTGATT AATTTAGTTG GACCGAGTTT AACCCCTGAA
ATAAAAGAAA TAGCATCCTA TCAATTAAAA ATAATGTCTC CAATAATCTT TCTATCTGGA
TTAATAGGTC TTGGATTTGG ATCACTAAAT GCTAAAAAAG AATTTTTCAT TCCCTCTATA
TCTCCATTAA TTTCAAGTCT AATAATCATA ATTTCAATAT CAAACTTTTG GATAAATAAA
GGAAATACGA CTGATCTAGA TACACTGAAT ATGAGAGGAG GAATTATTTT AGCAAAGGCA
ACATTTATAG GTGCCCTATC TCAATATTTA ATTCAAATAC CGTTCCTAAT TAAAAAAGGA
ATATTTGCGA TAAGTTTTTC AATACAAACA AAATATTCAG AAATAAAAAG GGCCTTGAGC
ATGATTGCCC CTGCATCACT TTCTTCAGGG ATGATACAAA TTAATGTTTT TACTGATTTA
TTCTTTGCAT CAAAAATAGT AGGTGCTGCA GCTGCCTTAA GTTACGCAAA CTTTTTAGTT
CAAGCACCTC TTGGAATAGT ATCAAATACT ATTTTAATTC CATTATTACC GGTTTTTGTA
AGTTTAAGAG CTCGAGAAAA TCATTTAAAA TTGATCAAAA AAATTCATCA GGGATTAATT
CTTTCTTCGA CTTCTATGGT GTTTTTAGGG TCGATATTTA TTTCACTTTC TACTCCAATA
GTTATATTAA TCTATGGTAG AGGTTCATTC AATCAAAATG CGGTTGATGT AGTAAGTCAA
CTATTAATTG CATATGGAAT AGGAATGCCT TTTTATCTAT GTAGAGATCT ATTGGTGAGA
GTTTTTTATG GTATAGAGGA TGCAAAAACA CCATTTAGAA TATCAATCAT AGCAATATTA
CTAAATTTAT TTTTTGACTG GTTTTTCATA GGAGGTTCAA GTCCATGGGG GGAGCTATCA
CCGCTAAACT TAGGAGTAAA TGGATTAGTC TTTTCAACTA CATTTGTTAA CTTCTTCGCT
TGTACACTTT TACTATTTAA ATTAAACCAT AAATTAGATA AACTAGATTT ACCTAATCTA
TTAGCTCAGA ATCTACGAAT TATTCTAATT GGTTTAATTT CTGGTATTTG CTCATTTTTT
ATTTTTAAAA TAATATTTTT ACCCTATAGT TTTATCAATT TATTATTGAA ATTAATAATT
TCATCTGGAA TTAGTCTGAT TATCTTTTAT TGTCTAGCAA TTATTCTTAA AATTGATGAG
ATTGATAATT TAAATAAGTT TTTAAAGGAG AAGTTTATTC GTCTTTAA
|
|---|
| Protein sequence | MSKSIKEIAF FVSLGTLLSK FGGLARQLVI AGAFGINAAY DAYNYAYIIP GFFLVLLGGI
NGPLHNSMVT LLADKNKVES RLFISSINNI LSIILLIISL FIFFSSDFLI NLVGPSLTPE
IKEIASYQLK IMSPIIFLSG LIGLGFGSLN AKKEFFIPSI SPLISSLIII ISISNFWINK
GNTTDLDTLN MRGGIILAKA TFIGALSQYL IQIPFLIKKG IFAISFSIQT KYSEIKRALS
MIAPASLSSG MIQINVFTDL FFASKIVGAA AALSYANFLV QAPLGIVSNT ILIPLLPVFV
SLRARENHLK LIKKIHQGLI LSSTSMVFLG SIFISLSTPI VILIYGRGSF NQNAVDVVSQ
LLIAYGIGMP FYLCRDLLVR VFYGIEDAKT PFRISIIAIL LNLFFDWFFI GGSSPWGELS
PLNLGVNGLV FSTTFVNFFA CTLLLFKLNH KLDKLDLPNL LAQNLRIILI GLISGICSFF
IFKIIFLPYS FINLLLKLII SSGISLIIFY CLAIILKIDE IDNLNKFLKE KFIRL
|
|---|
| |