Gene PMN2A_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1542 
Symbol 
ID3606940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp211797 
End bp213032 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content36% 
IMG OID637688420 
Productputative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) 
Protein accessionYP_292733 
Protein GI72383378 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.357334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAA TTGCAGTTGT AGAATGTATT CCTGAAAAAA ACCTGGACTG TTCAAAAGAA 
ATTTTGAAGA ATTTTGCAAA GCATAACTGG GTATATCTAG CGACTCCAAA AGATCAAACG
AAAATCCCCA CATCGTCAAC CTTACCTGAA GGAGAAGGAA TAATCATTTC AAGCGGGGGC
AGCATTGGAG GGCCAAATCT TTGTTTCCAA TCACTTAAAA ATCTCACTAA TTCGGCTTTA
TCAACCGGAA AGTGGTTAAA GAATCATGGC CTTAAGCCAA ATGAATGCAT CATTCTCAAT
TCACTACCTT TGCATCATAT AAGTGGTTTC ATGCCTTGGT GGAGACATCA GACTTGGGGA
TCTGGGTATT ACTGGATTTC AAATTCTATA ATGCATAAAC CACTTCAACT TAAGCAATTT
AGTGAAGCAT TAACTAATAA ACATAGACGT CCATTAATTA CATCCCTAGT TCCAACTCAA
TTATTATCTT TGATAGATAA TACTGATGGT TTAAAATGGC TTCAATCCCT TGCTGTGATA
TGGGTTGGAG GAGCTTCCAT CCCTATAGAC CTTGCTGAAA AAGCACGCAG AAAGTCTATT
AATCTAGCTC CTTGTTATGG GGCCACTGAA ACAGTAGCAA TGGTGACTTG CCTTAGTCCT
AAAGACTTTT TAAATGGAAG TAATAGTGTT GGGTTCCCTC TCGAAGATGT TGAGATAGAA
ATCAACAAAA GAAATTCACT TAAGATTAAA ACCAGTAGAA TTGCAACTTC AAAATGGAAG
AATAATAAAT TCGAATCAAT TAAAGACTCA AATGGATGGT GGGAAGCAGG CGATCTAGCG
CAATACATCA TTCTAGACAA TAGAAAAGCA ATACAAATCC TAGGTAGAAG AGATTCAGCT
ATAAATTCGG GCGGTGAAAC GATTTTTCCA GAAGATATCG AAATGGAATT AATGAAAATA
ATCTCAAAAA ATCAAATCCC AATTAAAGAT ATTTTTGTAC TAGGAGTTAG TGACAAGAAA
TGGGGACAAC GTTTAGTTGC CTTAACAAAA TTCAAAGGGA AAGAACTAAA CAGATATCCA
ATCATTTCAC TTCTGAATGA TCTCATTGAA GACTGGCAAC CATCCAAAAA ACCACTGAAC
TGGTACGATT GTCCAAAACT TTCAAGAAAT ATCAATAAAA AATGGGAAAT AAAAAAATGG
CAAGATTGGA TAGCCTTTAA TAAACCTATT AACTAA
 
Protein sequence
MTKIAVVECI PEKNLDCSKE ILKNFAKHNW VYLATPKDQT KIPTSSTLPE GEGIIISSGG 
SIGGPNLCFQ SLKNLTNSAL STGKWLKNHG LKPNECIILN SLPLHHISGF MPWWRHQTWG
SGYYWISNSI MHKPLQLKQF SEALTNKHRR PLITSLVPTQ LLSLIDNTDG LKWLQSLAVI
WVGGASIPID LAEKARRKSI NLAPCYGATE TVAMVTCLSP KDFLNGSNSV GFPLEDVEIE
INKRNSLKIK TSRIATSKWK NNKFESIKDS NGWWEAGDLA QYIILDNRKA IQILGRRDSA
INSGGETIFP EDIEMELMKI ISKNQIPIKD IFVLGVSDKK WGQRLVALTK FKGKELNRYP
IISLLNDLIE DWQPSKKPLN WYDCPKLSRN INKKWEIKKW QDWIAFNKPI N