Gene PMN2A_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1531 
Symbol 
ID3606929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp202373 
End bp203626 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content41% 
IMG OID637688409 
Producttryptophan synthase subunit beta 
Protein accessionYP_292722 
Protein GI72383367 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.636717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGGTA CACTCCCAAC ACAATTTAAA GATTCGGATT TATCTCCTTT AACAAGGCCA 
AATACTCTTG GTCGATTTGG TAAGTATGGG GGGCAATATG TTCCTGAAAC TTTAATACCT
GCTCTTATTG AATTAGAGCA AGCTGCTAAA GAAGCATGGA AAGATTCTTC ATTCAATTCA
GAACTAAATC ATTTACTAAA AACATACGTA GGAAGATCAA CTCCTCTTTA TGAAGCCACA
AGACTAACTG AACATTACAG AAAAAATACA TTAAAAGGTC CAAGGATTTG GCTTAAAAGA
GAAGATTTAA ATCACACAGG CGCACACAAA ATAAATAATG CACTTGGGCA AGCTCTTCTT
GCGATTCGGA TGGGAAAAAA AAGAATTATT GCTGAAACTG GAGCTGGTCA GCATGGAGTT
GCAACTGCGA CAGTCTGCGC TCGTTTTGGA TTGGAGTGCA TTATCTATAT GGGCAAAGAA
GATATGAGAA GACAAGCCTT AAACGTATTC CGAATGCAAT TGCTTGGAGC CTCAGTGAGG
CCAGTAACAA GTGGAACAGC AACACTCAAA GATGCAACCA GCGAAGCTAT TCGGGATTGG
GTTACTAATG TTGAAACGAC TCATTATATT CTCGGTTCAG TTGCAGGCCC ACATCCATAT
CCAATGTTGG TCAGAGATTT TCACGCAGTT ATTGGAGAAG AAACAAAGCA ACAATGTAAA
CAAGCTTTTG GGCGGTCTCC AGATGTTCTT CTTGCTTGTG TTGGTGGGGG ATCGAATGCG
ATGGGTCTTT TCCATTCTTT TGTTGAAGAC AAAAGTGTAA GAATGATTGG AGTTGAAGCT
GCGGGAGATG GAGTCGAAAC AGGTCGCCAT GCAGCGACAA TTACTGAAGG AAGAATAGGA
GTTCTCCACG GCGCGATGAG TCTCTTACTA CAAGACAAAG ATGGGCAAGT TGAGGAGGCG
CATTCCATTA GCGCAGGTCT TGATTATCCA GGGGTTGGGC CGGAGCATAG TTACTTAAAA
GAAATTGGAC GTGCTGAATA TGCTGCTGTT ACTGACACTG AAGCCATAGA AGCGCTGCAA
TTAGTTAGTA AATTGGAAGG TATTATTCCT GCTCTAGAGA CTGCTCATGC ATTTGCCTAT
CTAGAAAAAC TTTGCCCAAC TCTCAATCAT AATTCTGAAA TTGTCATTAA CTGCTCTGGC
AGAGGGGATA AAGACGTGAA TACTGTTGCT GAAAAACTAG GATCAGAAAT ATAA
 
Protein sequence
MTGTLPTQFK DSDLSPLTRP NTLGRFGKYG GQYVPETLIP ALIELEQAAK EAWKDSSFNS 
ELNHLLKTYV GRSTPLYEAT RLTEHYRKNT LKGPRIWLKR EDLNHTGAHK INNALGQALL
AIRMGKKRII AETGAGQHGV ATATVCARFG LECIIYMGKE DMRRQALNVF RMQLLGASVR
PVTSGTATLK DATSEAIRDW VTNVETTHYI LGSVAGPHPY PMLVRDFHAV IGEETKQQCK
QAFGRSPDVL LACVGGGSNA MGLFHSFVED KSVRMIGVEA AGDGVETGRH AATITEGRIG
VLHGAMSLLL QDKDGQVEEA HSISAGLDYP GVGPEHSYLK EIGRAEYAAV TDTEAIEALQ
LVSKLEGIIP ALETAHAFAY LEKLCPTLNH NSEIVINCSG RGDKDVNTVA EKLGSEI