Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1481 |
Symbol | |
ID | 3606878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 155917 |
End bp | 157551 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637688358 |
Product | beta-N-acetylhexosaminidase |
Protein accession | YP_292672 |
Protein GI | 72383317 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.152176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT CTGATCTTAG AAGACAAGTA GCTGAATTAT TTATAGTTCG AGCAAGTGGA TTTAATCTTG ATTCGCAACG TCTATACCCT AACTTAGAGG AATCTAATTC AAATCTAAAA AGACTTTTAG AAGAAGGTGT TGGTGGAGTT ATTGTTCTAG GGGGAACTGT AAAAGAATTA GAAATTCGTT GCAATATCTT GAAAAAATGG TCTGGTAGAC CTCTTCTTTT ATGTGCTGAC ATTGAGGAAG GTGTTGGTCA AAGATTTTAT GGAGGAACAA AGTTTGTTCC TCCAATGGGT ATTGCTCAGA TTTATAAAAA AGATCAAACT TTAGCAATTT CTATTGCTGA GAAAATTGGT TATTTTACTG GTAAAGAAGC AAAAAAAATT GGTTTAAATT GGCTATTAGC CCCAGTCTGT GATATTAATA ACAATCCAAA TAACCCAGTT ATAAATCTAA GAGCTTGGGG AGAAGAGCCT GAAACAGTAA AAAGTTTAAC TTCTGCTTTT CAGCGGGGTG TTTCTAGATC AAAAATGCTG ACTTGTGCAA AACATTTTCC TGGTCATGGA AATTCTGAAG TTGACTCTCA CTTGGATTTA CCAGAAATAC ATCATGACTT ATCTAAATTA GAGAAATTTG AGTTAATTCC ATTTAAGTCT TTAATCAATC AAGGAGTAAA TAGTGTCATG ATCGGGCATT TACTTTTTCC AAAGATTGAT CCTATTTTTC CTGCAACACT TTCAAAAAGA GTGGTTACCG ATTTGTTACG TATCAAATTT AAATACGATG GTTTAGTTGT CAGTGATGCC TTAGTTATGA ATGCAATAAC AAATAAATAT AGTAGTGGTA AGGCTGCAGT TATGGCATTT GATGCAGGAA TTGATTTGAT TATGATGCCA AAAGATATTG ATGAGGCAAT AGATTCTCTT ACCGATGCTT TTTATTCAGG AAAAATTTCT TTAGAAAGGT TAAATATATC TAGAGAAAGA AGAAAAAAAC AACTTGATTT AGTTAGCAAC GAAGCGGATT TCAAAAAAGA AGATTTGAAC AATGAAGATA TTAAAAATAA ATTTTTATTG GATGCCTCTA AATTTAGTAA TTCTATAATA AAAAGTTCAA TTTTTGTCCG AGAAGAAAGT ACTATAAAAG CTGAATATAA TGATATAAAT CTTATACAAA TTGATAATTT TGATCAAGTA GCTAATAAAT TTATTCCTGC ATTAGATTTC CCTAAGGCAG TAGGTTTTAA AAATTTAATT ATACATCCAC TTGGTATCAG TCCGTGGGGA AAAACTAATA AGAATTTTTT AGAACTGGGG CAATTTAGTA ATAGTAAGAT TCTTGTTCAG CTTTTTGTGA GAGGTAAACC ATTTATTGGA TTAGATTATC ATAATGATCA TTGGATAGAC ACTATAGAAA AATTAGAATT TGAGCAAAGA TTATCAGGAA TTATAATATA TGGGTGTCCA TATTTATTTG ATAAAATAAA AAAAACTATT CATAAAAATA TTCCTTTAGC TTATAGCCCT AGTCAAACAG AGGAAGCACA AAATCAAATT TTAAGTCGTA TTTTGCAATC AAAAACAACT CAAAAGGAAA TTGATAAAGA ATCAAGCATA GAATTTACTG ATTGA
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Protein sequence | MNKSDLRRQV AELFIVRASG FNLDSQRLYP NLEESNSNLK RLLEEGVGGV IVLGGTVKEL EIRCNILKKW SGRPLLLCAD IEEGVGQRFY GGTKFVPPMG IAQIYKKDQT LAISIAEKIG YFTGKEAKKI GLNWLLAPVC DINNNPNNPV INLRAWGEEP ETVKSLTSAF QRGVSRSKML TCAKHFPGHG NSEVDSHLDL PEIHHDLSKL EKFELIPFKS LINQGVNSVM IGHLLFPKID PIFPATLSKR VVTDLLRIKF KYDGLVVSDA LVMNAITNKY SSGKAAVMAF DAGIDLIMMP KDIDEAIDSL TDAFYSGKIS LERLNISRER RKKQLDLVSN EADFKKEDLN NEDIKNKFLL DASKFSNSII KSSIFVREES TIKAEYNDIN LIQIDNFDQV ANKFIPALDF PKAVGFKNLI IHPLGISPWG KTNKNFLELG QFSNSKILVQ LFVRGKPFIG LDYHNDHWID TIEKLEFEQR LSGIIIYGCP YLFDKIKKTI HKNIPLAYSP SQTEEAQNQI LSRILQSKTT QKEIDKESSI EFTD
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