Gene PMN2A_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1469 
Symbol 
ID3606866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp148094 
End bp149035 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content33% 
IMG OID637688345 
Productthioredoxin domain-containing protein 
Protein accessionYP_292660 
Protein GI72383305 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACCTT CAAGACTAAA GAGTCGTCGA CGCCAAGATC TAGGTTCCAA ATGGGCGAGA 
GTTGCAATAG CTATATTATC AACAGTTGGT GTTATAGATA CAGGATCCAT AACACTAAAT
AAATGGGGGA TCATAGGAAA TTTAAACTGT CCAGGTGGAT TAGGAGGCTG CGATAAAGTT
TTAAATAGCC CTTGGGGGAC TTTCTTTCAA ACAAATAATT TCTCTATTCC ATTATCATTA
ATAGGTTTAA TTAGTTATTT ATTAATATTA TTAATGGCAA TATTCCCATT AATACCTATT
CTCAAAAACC AAAAAAATAA TATCTCAAAA GTTGCATGGT GGGGATCTTT TTATATATCT
ACATCTACTT TTATTTTCAG CTTAATTTTA ATATCAGTAA TGATATTTAA AATTAAAGCT
TTCTGTTTTT TCTGTCTTCT TTCTTTTCTT ATATCACTTT CAGTCCTATT ATTAAATATA
ATTGGAGGCA GTTGGGAAGA TTATGGTAAA TTATTTTTTA GAGGTTTTCT TATGTCAGTA
GCAGTTCTTT TAGCAGGGCT AATATGGTCA TCATCAGTCG ATCCTGCTAT CAAGGAAGTT
TCAAATAATA TTTCAGGCAT GCCACCTGCG GTAATAGCTA TAAGTTCTCC TGACAAAATA
AAACTCGCTG AACATTTAAC AAAAGAAGGA GCAGTCATGT ATAACGCTTA TTGGTGTCCA
CATTGTCATG ATCAAAAAGA AATGTTCGGA AAAGAAGCTG CAGAAAAATT AAATTTAGTT
GAGTGTGCAA AAGATGGTTT TAACAACAAA AGAGAACTTT GTGAAGCTAA AGGGATAACT
GGTTTCCCTT CTTGGGAAAT TAATGGCTCA ATTGATTCAG GAGTGAAAAG CCTAGAAGAA
TTAGCTGACC TTACAAATTA CAAAGACTCT AAAGATTTTT AG
 
Protein sequence
MGPSRLKSRR RQDLGSKWAR VAIAILSTVG VIDTGSITLN KWGIIGNLNC PGGLGGCDKV 
LNSPWGTFFQ TNNFSIPLSL IGLISYLLIL LMAIFPLIPI LKNQKNNISK VAWWGSFYIS
TSTFIFSLIL ISVMIFKIKA FCFFCLLSFL ISLSVLLLNI IGGSWEDYGK LFFRGFLMSV
AVLLAGLIWS SSVDPAIKEV SNNISGMPPA VIAISSPDKI KLAEHLTKEG AVMYNAYWCP
HCHDQKEMFG KEAAEKLNLV ECAKDGFNNK RELCEAKGIT GFPSWEINGS IDSGVKSLEE
LADLTNYKDS KDF