Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1465 |
Symbol | |
ID | 3606862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 142375 |
End bp | 143955 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637688341 |
Product | outer membrane efflux protein |
Protein accession | YP_292656 |
Protein GI | 72383301 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.505044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGAG TGAAGAGAAA GTTTCTAATT GTTGCAGGTT TATTTATATC TGGGCTCAAT CCTTTGTGGG CTACAAGTTC GCAAAAAATA ACTTCCAATA CAAAGATAAA AGGAAACTCA AGTAAAAGCC TAAGTCAAAA TCAAAAACAA CAGCGGGTCT TATATGAATT AAATGCGCCT GAAGATCTTT TTTTACCCTC TAGATCACGC GAAGTATTAG TAAAAACTTA TCAAAAAGTT AACCTTGATC AGTTAGAAAA TTTACTTATA AACAACAACC GAGCAATTAA AATCTACTTA GAAAGAGTTG AGCAAGCCAA ATCAATATTA AAAAGTTCTT TATCCTCATG GTACCCAACA TTAAACCTAA CAGCTAATGG TATTCCCCAA TATTTTGAAT CTAATAACTT TAATGAATCA AGCGTAATAC AAGATACTTC GAGTAAACAA TGGAGTTCCT CTATCTCCGC TCAAGTAAAA TGGGATTTAA TTAATCCTGC AAGAGTCCCA GAGATAGCAT CAGCTAGAGA TAGTTTTGAA AAGTCAAAAT ATTCTTACGC AATAATTTTA AGAGATTTAA AATTAGAGGC AAAAAAACGT TACTTCAATT TGCAAAAAGC CAATGAGGAA ATAGAAGTAG CAAAGAAATC AATTGAATCC TCGACTATTG GGTTAAGAGA CGCAGAAATT AGATTTGAAT CAGGTATTGG TACGAAATTA GAAGTTCTAG AAGCTAGAAC TCAATTAGCT AGAGATCAGC AATTGTTTAA TATTAAATTA GGTGATCAAA AAATTGGTCA AAGATCTCTT GCTGAAATAC TTAATTTTCC AGAGGATGTA ACACCATTAA TTGGTACAAA AACTCAAGTT ACAGGTATAT GGGATTTATC ATTAGAGGAT AGTATTATAG CTGCTTATAA TTCAAGAGAA GAACTCGAAA GTATCCTATT AGAAATATCA ATTAATAATA GTAATGCAAA TGCTGCACTT GCTGCTAGCC AACCAAAATT AAGCATTGTA AATACATCGA CCTCTTCATT TGCGAAAGGT GAGTTAAATC AAATATCTCC AAACACCAGC AACACATCCT CCAATTTTTC TAACACCATT GGGCTCAATG CAACATGGTT TATTTTTGAT GGAGGCAATT CAAGATCTTT GTATAATTAC AATAAAAGTA AAGCAAAAGA AGCAAAACTA AATTTTGCCG CAAGAAGAGC TCAAATTAGA CAAGAAGTTG AACAAGTATT CTTCAAACTA GAGTCGGCTA AACTAAATAT TTCTGCTTCG TACACAGAAG TTTTGTCTGC AAGAGAGTCT TTAAGACTTG CAAAACTTAG ATACAAATCA GGTATTACTA CACAACGAGA AGTTGTAAAC AACCAAAGAG ATTTAACTGA TTCCGAGGTT CGTTATATTA TTTCGGTCAC TAGCTATAAC ACTCTATTAG CTGACTTAAG TAGACAAACG GGTTTAGATA ACATCAAACC ATGTGATATC AAAGTCAATC CACAAAATCA AAGTGACATA GATAGCAAAT CACTCTATGA ATCAAATTTA ATTCCCCTAT GTCAGCTATA G
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Protein sequence | MRRVKRKFLI VAGLFISGLN PLWATSSQKI TSNTKIKGNS SKSLSQNQKQ QRVLYELNAP EDLFLPSRSR EVLVKTYQKV NLDQLENLLI NNNRAIKIYL ERVEQAKSIL KSSLSSWYPT LNLTANGIPQ YFESNNFNES SVIQDTSSKQ WSSSISAQVK WDLINPARVP EIASARDSFE KSKYSYAIIL RDLKLEAKKR YFNLQKANEE IEVAKKSIES STIGLRDAEI RFESGIGTKL EVLEARTQLA RDQQLFNIKL GDQKIGQRSL AEILNFPEDV TPLIGTKTQV TGIWDLSLED SIIAAYNSRE ELESILLEIS INNSNANAAL AASQPKLSIV NTSTSSFAKG ELNQISPNTS NTSSNFSNTI GLNATWFIFD GGNSRSLYNY NKSKAKEAKL NFAARRAQIR QEVEQVFFKL ESAKLNISAS YTEVLSARES LRLAKLRYKS GITTQREVVN NQRDLTDSEV RYIISVTSYN TLLADLSRQT GLDNIKPCDI KVNPQNQSDI DSKSLYESNL IPLCQL
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