Gene PMN2A_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1465 
Symbol 
ID3606862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp142375 
End bp143955 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content33% 
IMG OID637688341 
Productouter membrane efflux protein 
Protein accessionYP_292656 
Protein GI72383301 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.505044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGAG TGAAGAGAAA GTTTCTAATT GTTGCAGGTT TATTTATATC TGGGCTCAAT 
CCTTTGTGGG CTACAAGTTC GCAAAAAATA ACTTCCAATA CAAAGATAAA AGGAAACTCA
AGTAAAAGCC TAAGTCAAAA TCAAAAACAA CAGCGGGTCT TATATGAATT AAATGCGCCT
GAAGATCTTT TTTTACCCTC TAGATCACGC GAAGTATTAG TAAAAACTTA TCAAAAAGTT
AACCTTGATC AGTTAGAAAA TTTACTTATA AACAACAACC GAGCAATTAA AATCTACTTA
GAAAGAGTTG AGCAAGCCAA ATCAATATTA AAAAGTTCTT TATCCTCATG GTACCCAACA
TTAAACCTAA CAGCTAATGG TATTCCCCAA TATTTTGAAT CTAATAACTT TAATGAATCA
AGCGTAATAC AAGATACTTC GAGTAAACAA TGGAGTTCCT CTATCTCCGC TCAAGTAAAA
TGGGATTTAA TTAATCCTGC AAGAGTCCCA GAGATAGCAT CAGCTAGAGA TAGTTTTGAA
AAGTCAAAAT ATTCTTACGC AATAATTTTA AGAGATTTAA AATTAGAGGC AAAAAAACGT
TACTTCAATT TGCAAAAAGC CAATGAGGAA ATAGAAGTAG CAAAGAAATC AATTGAATCC
TCGACTATTG GGTTAAGAGA CGCAGAAATT AGATTTGAAT CAGGTATTGG TACGAAATTA
GAAGTTCTAG AAGCTAGAAC TCAATTAGCT AGAGATCAGC AATTGTTTAA TATTAAATTA
GGTGATCAAA AAATTGGTCA AAGATCTCTT GCTGAAATAC TTAATTTTCC AGAGGATGTA
ACACCATTAA TTGGTACAAA AACTCAAGTT ACAGGTATAT GGGATTTATC ATTAGAGGAT
AGTATTATAG CTGCTTATAA TTCAAGAGAA GAACTCGAAA GTATCCTATT AGAAATATCA
ATTAATAATA GTAATGCAAA TGCTGCACTT GCTGCTAGCC AACCAAAATT AAGCATTGTA
AATACATCGA CCTCTTCATT TGCGAAAGGT GAGTTAAATC AAATATCTCC AAACACCAGC
AACACATCCT CCAATTTTTC TAACACCATT GGGCTCAATG CAACATGGTT TATTTTTGAT
GGAGGCAATT CAAGATCTTT GTATAATTAC AATAAAAGTA AAGCAAAAGA AGCAAAACTA
AATTTTGCCG CAAGAAGAGC TCAAATTAGA CAAGAAGTTG AACAAGTATT CTTCAAACTA
GAGTCGGCTA AACTAAATAT TTCTGCTTCG TACACAGAAG TTTTGTCTGC AAGAGAGTCT
TTAAGACTTG CAAAACTTAG ATACAAATCA GGTATTACTA CACAACGAGA AGTTGTAAAC
AACCAAAGAG ATTTAACTGA TTCCGAGGTT CGTTATATTA TTTCGGTCAC TAGCTATAAC
ACTCTATTAG CTGACTTAAG TAGACAAACG GGTTTAGATA ACATCAAACC ATGTGATATC
AAAGTCAATC CACAAAATCA AAGTGACATA GATAGCAAAT CACTCTATGA ATCAAATTTA
ATTCCCCTAT GTCAGCTATA G
 
Protein sequence
MRRVKRKFLI VAGLFISGLN PLWATSSQKI TSNTKIKGNS SKSLSQNQKQ QRVLYELNAP 
EDLFLPSRSR EVLVKTYQKV NLDQLENLLI NNNRAIKIYL ERVEQAKSIL KSSLSSWYPT
LNLTANGIPQ YFESNNFNES SVIQDTSSKQ WSSSISAQVK WDLINPARVP EIASARDSFE
KSKYSYAIIL RDLKLEAKKR YFNLQKANEE IEVAKKSIES STIGLRDAEI RFESGIGTKL
EVLEARTQLA RDQQLFNIKL GDQKIGQRSL AEILNFPEDV TPLIGTKTQV TGIWDLSLED
SIIAAYNSRE ELESILLEIS INNSNANAAL AASQPKLSIV NTSTSSFAKG ELNQISPNTS
NTSSNFSNTI GLNATWFIFD GGNSRSLYNY NKSKAKEAKL NFAARRAQIR QEVEQVFFKL
ESAKLNISAS YTEVLSARES LRLAKLRYKS GITTQREVVN NQRDLTDSEV RYIISVTSYN
TLLADLSRQT GLDNIKPCDI KVNPQNQSDI DSKSLYESNL IPLCQL