Gene PMN2A_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1444 
Symbol 
ID3606841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp125145 
End bp125846 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content33% 
IMG OID637688320 
Productaccessory factor Bvg 
Protein accessionYP_292635 
Protein GI72383280 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.327883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACTCAG AAGAAAATTT CCTAATGATT GGCAATACAA GATGGCATTG GGCAAACAAA 
GTTAAAAAAG ATTGGAAATA TTTTCATACC TCACCAAATC CAATCGAATT TAAAGATAAG
GATTATTCTC AATTAACTTG GGCCTCCGTT GGTCCCATCC CTGAGGATAT TAAATTATGC
CCTTCAAAAG AAATAACTTT AGACAATGTT CCCCTAAACA ATCTTCCAAC TAATTTAGGA
ATTGACAGAG CTCTTTCTTC ATGGAGTGCT TTTAAAAAAC AATCATTTTT AAAAAGCAAA
GAACAAGATT TAATTGTGAT AGACGCAGGA ACAATATTAA GCGTCACAAA AGTATCAAAC
AAAGGAGAAT TCATTGGGGG CCAACTAATT TCCGGTTTCA GCCTTCAATT ATCTTCAATG
TCAAACCGTG CAATGAATTT AGAAACTCCC ATTGTTAAAA AAATCCCAAC TGAAACATTT
CAATATGAGA CTCATAATGC AATGATAAGA GGGTCAATGA ATGCGCTAAT AGGATTAATC
TTAACACTTT TTGAGGAGAC TAAATTACCT ATATGGATGT GCGGAGGTGA TGCTCCAATC
ATATTAAATG AACTCAAAAA TACAAACATT GACATCAATC ATTCTCCCAA TCTAGTTCTA
GAAGGAATGA TTGATGTATA CAAAAAAATT AATTCAATTT AA
 
Protein sequence
MYSEENFLMI GNTRWHWANK VKKDWKYFHT SPNPIEFKDK DYSQLTWASV GPIPEDIKLC 
PSKEITLDNV PLNNLPTNLG IDRALSSWSA FKKQSFLKSK EQDLIVIDAG TILSVTKVSN
KGEFIGGQLI SGFSLQLSSM SNRAMNLETP IVKKIPTETF QYETHNAMIR GSMNALIGLI
LTLFEETKLP IWMCGGDAPI ILNELKNTNI DINHSPNLVL EGMIDVYKKI NSI