Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1420 |
Symbol | |
ID | 3606816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 97962 |
End bp | 101513 |
Gene Length | 3552 bp |
Protein Length | 1183 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637688295 |
Product | condensin subunit Smc |
Protein accession | YP_292611 |
Protein GI | 72383256 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATTC CACTTGAAGA CGGCTTTACT GTTGTAACAG GTCCAAATGG TTCAGGTAAA AGTAATATTC TTGATGGGGT TTTATTTTGT TTAGGGCTTG CAAATAGTCG AGGCATGAGA GCAGACAGAT TGCCTGACTT AGTCAATAGT GGCGTATTAA AAGCTGGAAA ATCTTCGGAA ACCAAAGTAA CTGTAAAATT TGATTTAACT GATTGGAAGC CCGATGAAGC CGAAGAAGGT ATAGAACCTA CTGAGGAAGG GCCTTGGATT AAGCATGATC AAAAAGAATG GACAGTATCA AGAAGATTAA AAGTTATGCC AGGTGGGTCA TATGCTTCCA CTTACAGCGC AGATGGTGAG ACTTGTAATT TACAGCAATT ACAAACCCAA TTAAGGCGAC TAAGAATCGA CCCTGAAGGG AGCAATGTTG TTATGCAGGG AGATGTTACT CGAATTGTTT CTATGAGTAA TAAAGATCGT AGAGGTCTAA TAGACGAACT TGCTGGTGTT GCACTATTTG ATACACGTAT TGATCAAACT CGTGCAAAGT TGGATGATGT TTATGAAAGG CAGGAACGTT GTCGGATTGT TGAACAAGAA CTCATTCTTT CCAAACAGCG TTTGCAAAAA GACTGTGAGA AAGCAAGTTT ATATAAAGAT CTAAAAAATC AATTATTAAT TGGCAGACAG CAAGAATTAG TTTTATCTTA TGAAAAGGCA AAAAAGGGAC TGGAAAAACT AGATATAGAT CACCAAGAAT TGCTTAAAAA AGAAAAAATA GATTCAGAAA AGTTACTTAA TCATGAAAAC GATTTAAGTA AATGCATAGA AAAATTAAAT ATCTTACAAA AAAATGTTAA AGAACTCGGT GAAGATCAAT TGCTTGAGGT TCAAGGTAAA TTAGCAGGGA TTGAATCCCA ACATAGAGAG CTAGAAAGAC AAGGACTTAA TCATAAAAAT GAAGGTGAGA AATTACAGGA ATCTAGAAAT AATCTTCTAC AGAAAAAGAA AGATTATCAA ACTGACTTGC AAAGTAAATT GAATGAGATT AATCCTGAAG AATTAGAAGA AGCTGACTTA AGATGTAAAG AGGCTGAGGC TTGGGTTGAA TCTTCTAGAA GGAAGCTTTC CGATGTAGCA GGTCGTTCTG GTGCATGGAT AGAAAAACAT CAGAAAGCCA GAGATGAACT TAATAAAATC CGATTGGAAT TAGATCCTAA AAGACTAGAG AAACAAAATA TTGAAGAAAG TTTATTGCAA TTAAATGTTA TTTTAAAAGA ATTAGAGACT GATCAAAAAG CTGATCAATC TTCCAATGAA AAAGTACATA TAGAAATTAG TAATTTGAAT AAAAAATGGG ATAGTATTTT AGATTTACTG TCTGTTAAGA AAGAAGAATT TCAAGTATTA GTATCTGAGA AGGATATACA AGAACGCACT AAATATAGAT TAGAGAAAGA ACAAGTCAAG CTTCAAAATG ATATTGCTCG TTTAGAAAGT AGGAAAGAAA TGATATCCGA AAGTCGAGGC ACTAATGCAA TAACTTTGTT ACTAGAGTCT GGTTTAGAAG GTATACATGG TCCTGTAGCT AATTTAGGTG AAGTGGAAGA TCGTTATAGG ATTGCTCTTG AAGTAGCGGC TGGAGCCAGG CTTGGGCAGG TTGTTGTAGA TAGCGATCAA ATTGCTGCAA AATCAATTGA TCTTTTAAAA CGAAAAAGAG CTGGAAGATT GACTTTTTTA CCTCTTAATA AGATTTTAAA AAACTCTCAA AGTAGGTCTG ATGTATTCCA GAGATCTGTT CACACTAATT TCAATAAAAG TACTGGATTA ATTGGCAAAG CTATTGATTT GATTCAATAT GATTCAATAT ATAAAAATGT TTTTTTGTAT GTATTTGGTG AAACAATTGT TTTTAGTGAC TTGTCATCAG CACGTGATCA AATTGGTATA AAAAGAGCTG TTACTTTAGA AGGTGAACTA CTTGAGAAGA GTGGAGCGAT GACTGGTGGA AGTTTAAATA ACAGAGCCTT GGGTTTAAGT TTTGGAAGAG TAAAAGATAA TGATGATTGT GATCTTTTGA AGAATCGATT ATTAGAAATT GGTGAGACTC TCACTAATTG TCAAAAGAAC GAAAATCAAC TCATAAATAA GCTAGACAAT CTTAGATCTC AGCTAAGTAA ATTAGAACAA GAGAAAGCTG CACTTGATGC TGAAAGAGTA ACTTCTAAAA GATCAAATTC ACCGTTATTA GAACGCCAAA GCCATCGCTC AAAAAGAATT AGCGATCTTC AAAAATCTAA AAAAGAAAAA CTATGTCAAT TAGAATCTAT TAATTTGATT ATTAAACCTT TAGAGGTCAT TTTATTAGAA ATTGAGAAGG AAGAGAAAAC AATAGATAAA TCAAGTGACT CATCTGTTTG GTCTAAATTG CAAAATGATT TAGAAGAGGC TGATAAAAAT CTTCTTTCTT TTAGGAATAA AAGAGATGAG ATTTCAAATA AGCAATCTCA AAATAAGCTT GCAATTGATC GATTAAATGA TCAAGAAACT GCTTTAATAA GCGAAGAAAA ACGATTAAAG GATTCCATAG ATACGCTTGC TTCTTCTCAT ATCGCTTGGC GTGAGCAAAG CAAACTACTT AATACAAATC GGCAAGATTT GATCAATCAA CAAAAAGATT TAGAAACTCG CTTTGGGGAA CAACGAAGAG AAAGAGATTG TGTGGAAGCA GATGTAGCTA AAAAAAGATT GAATTTACAA GAAATGCAAT GGAGTCTCCA ACGTTTAATG GAAGATCAAA AAAACATGAA GGAAGAGATA CGAATGGAAA CTATTCGATG TACTGAATTA GAGAGGAAGC TTCCTAATCC TAGGCCTTTG ATTTCAGATG AAATAAGAGA TAATGGTTTG GATGATTTAC TTTCTAAATT GGAAGATTTA CAGAAAAGAA TGGAGGAATT GGAACCTGTC AATATGCTTG CATTGGAAGA GTTGGCTAAA TTAGAAGAGA GACTGAATGA ACTTGAAAAT AGACTTCAGG TTCTAACTGA TGAAAGATCG GAGTTATTAC TTCGAATAGA GACAGTTGCA ACGTTAAGAG AGGAGGCCTT TATGGAGGCT TTTAAGGCGG TTGATGTACA TTTTCGTGAA ATCTTTGCAA GTCTTTCTGA AGGAGATGGA CATTTGCAGC TTGAAAATCC TGAGGAGCCT TTGGAGGGTG GCTTGACTTT GGTTGCTCAT CCAAAAGGTA AGCCTGTAAG ACGGCTTGCG GCTATGTCAG GTGGAGAAAA ATCTTTAACA GCTTTGAGTT TTCTTTTTGC CTTGCAACGT TTTAGACCCT CTCCTTTTTA TGCCCTTGAT GAAGTAGATA GTTTCTTGGA TGGAGTAAAT GTTGAAAGGT TAGCGGCCTT AATTGCTCAA CAAGCTGAAC AGGCACAATT TCTTGTCGTA AGTCATAGAA GACCTATGAT TGGAGCATCA ATGAGGACTA TTGGGGTTAC ACAAGCAAGG GGAAATCATA CTCAAGTTGT TGGGTTGCCA ATCGCAGCTT GA
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Protein sequence | MSIPLEDGFT VVTGPNGSGK SNILDGVLFC LGLANSRGMR ADRLPDLVNS GVLKAGKSSE TKVTVKFDLT DWKPDEAEEG IEPTEEGPWI KHDQKEWTVS RRLKVMPGGS YASTYSADGE TCNLQQLQTQ LRRLRIDPEG SNVVMQGDVT RIVSMSNKDR RGLIDELAGV ALFDTRIDQT RAKLDDVYER QERCRIVEQE LILSKQRLQK DCEKASLYKD LKNQLLIGRQ QELVLSYEKA KKGLEKLDID HQELLKKEKI DSEKLLNHEN DLSKCIEKLN ILQKNVKELG EDQLLEVQGK LAGIESQHRE LERQGLNHKN EGEKLQESRN NLLQKKKDYQ TDLQSKLNEI NPEELEEADL RCKEAEAWVE SSRRKLSDVA GRSGAWIEKH QKARDELNKI RLELDPKRLE KQNIEESLLQ LNVILKELET DQKADQSSNE KVHIEISNLN KKWDSILDLL SVKKEEFQVL VSEKDIQERT KYRLEKEQVK LQNDIARLES RKEMISESRG TNAITLLLES GLEGIHGPVA NLGEVEDRYR IALEVAAGAR LGQVVVDSDQ IAAKSIDLLK RKRAGRLTFL PLNKILKNSQ SRSDVFQRSV HTNFNKSTGL IGKAIDLIQY DSIYKNVFLY VFGETIVFSD LSSARDQIGI KRAVTLEGEL LEKSGAMTGG SLNNRALGLS FGRVKDNDDC DLLKNRLLEI GETLTNCQKN ENQLINKLDN LRSQLSKLEQ EKAALDAERV TSKRSNSPLL ERQSHRSKRI SDLQKSKKEK LCQLESINLI IKPLEVILLE IEKEEKTIDK SSDSSVWSKL QNDLEEADKN LLSFRNKRDE ISNKQSQNKL AIDRLNDQET ALISEEKRLK DSIDTLASSH IAWREQSKLL NTNRQDLINQ QKDLETRFGE QRRERDCVEA DVAKKRLNLQ EMQWSLQRLM EDQKNMKEEI RMETIRCTEL ERKLPNPRPL ISDEIRDNGL DDLLSKLEDL QKRMEELEPV NMLALEELAK LEERLNELEN RLQVLTDERS ELLLRIETVA TLREEAFMEA FKAVDVHFRE IFASLSEGDG HLQLENPEEP LEGGLTLVAH PKGKPVRRLA AMSGGEKSLT ALSFLFALQR FRPSPFYALD EVDSFLDGVN VERLAALIAQ QAEQAQFLVV SHRRPMIGAS MRTIGVTQAR GNHTQVVGLP IAA
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