Gene PMN2A_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1420 
Symbol 
ID3606816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp97962 
End bp101513 
Gene Length3552 bp 
Protein Length1183 aa 
Translation table11 
GC content35% 
IMG OID637688295 
Productcondensin subunit Smc 
Protein accessionYP_292611 
Protein GI72383256 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTC CACTTGAAGA CGGCTTTACT GTTGTAACAG GTCCAAATGG TTCAGGTAAA 
AGTAATATTC TTGATGGGGT TTTATTTTGT TTAGGGCTTG CAAATAGTCG AGGCATGAGA
GCAGACAGAT TGCCTGACTT AGTCAATAGT GGCGTATTAA AAGCTGGAAA ATCTTCGGAA
ACCAAAGTAA CTGTAAAATT TGATTTAACT GATTGGAAGC CCGATGAAGC CGAAGAAGGT
ATAGAACCTA CTGAGGAAGG GCCTTGGATT AAGCATGATC AAAAAGAATG GACAGTATCA
AGAAGATTAA AAGTTATGCC AGGTGGGTCA TATGCTTCCA CTTACAGCGC AGATGGTGAG
ACTTGTAATT TACAGCAATT ACAAACCCAA TTAAGGCGAC TAAGAATCGA CCCTGAAGGG
AGCAATGTTG TTATGCAGGG AGATGTTACT CGAATTGTTT CTATGAGTAA TAAAGATCGT
AGAGGTCTAA TAGACGAACT TGCTGGTGTT GCACTATTTG ATACACGTAT TGATCAAACT
CGTGCAAAGT TGGATGATGT TTATGAAAGG CAGGAACGTT GTCGGATTGT TGAACAAGAA
CTCATTCTTT CCAAACAGCG TTTGCAAAAA GACTGTGAGA AAGCAAGTTT ATATAAAGAT
CTAAAAAATC AATTATTAAT TGGCAGACAG CAAGAATTAG TTTTATCTTA TGAAAAGGCA
AAAAAGGGAC TGGAAAAACT AGATATAGAT CACCAAGAAT TGCTTAAAAA AGAAAAAATA
GATTCAGAAA AGTTACTTAA TCATGAAAAC GATTTAAGTA AATGCATAGA AAAATTAAAT
ATCTTACAAA AAAATGTTAA AGAACTCGGT GAAGATCAAT TGCTTGAGGT TCAAGGTAAA
TTAGCAGGGA TTGAATCCCA ACATAGAGAG CTAGAAAGAC AAGGACTTAA TCATAAAAAT
GAAGGTGAGA AATTACAGGA ATCTAGAAAT AATCTTCTAC AGAAAAAGAA AGATTATCAA
ACTGACTTGC AAAGTAAATT GAATGAGATT AATCCTGAAG AATTAGAAGA AGCTGACTTA
AGATGTAAAG AGGCTGAGGC TTGGGTTGAA TCTTCTAGAA GGAAGCTTTC CGATGTAGCA
GGTCGTTCTG GTGCATGGAT AGAAAAACAT CAGAAAGCCA GAGATGAACT TAATAAAATC
CGATTGGAAT TAGATCCTAA AAGACTAGAG AAACAAAATA TTGAAGAAAG TTTATTGCAA
TTAAATGTTA TTTTAAAAGA ATTAGAGACT GATCAAAAAG CTGATCAATC TTCCAATGAA
AAAGTACATA TAGAAATTAG TAATTTGAAT AAAAAATGGG ATAGTATTTT AGATTTACTG
TCTGTTAAGA AAGAAGAATT TCAAGTATTA GTATCTGAGA AGGATATACA AGAACGCACT
AAATATAGAT TAGAGAAAGA ACAAGTCAAG CTTCAAAATG ATATTGCTCG TTTAGAAAGT
AGGAAAGAAA TGATATCCGA AAGTCGAGGC ACTAATGCAA TAACTTTGTT ACTAGAGTCT
GGTTTAGAAG GTATACATGG TCCTGTAGCT AATTTAGGTG AAGTGGAAGA TCGTTATAGG
ATTGCTCTTG AAGTAGCGGC TGGAGCCAGG CTTGGGCAGG TTGTTGTAGA TAGCGATCAA
ATTGCTGCAA AATCAATTGA TCTTTTAAAA CGAAAAAGAG CTGGAAGATT GACTTTTTTA
CCTCTTAATA AGATTTTAAA AAACTCTCAA AGTAGGTCTG ATGTATTCCA GAGATCTGTT
CACACTAATT TCAATAAAAG TACTGGATTA ATTGGCAAAG CTATTGATTT GATTCAATAT
GATTCAATAT ATAAAAATGT TTTTTTGTAT GTATTTGGTG AAACAATTGT TTTTAGTGAC
TTGTCATCAG CACGTGATCA AATTGGTATA AAAAGAGCTG TTACTTTAGA AGGTGAACTA
CTTGAGAAGA GTGGAGCGAT GACTGGTGGA AGTTTAAATA ACAGAGCCTT GGGTTTAAGT
TTTGGAAGAG TAAAAGATAA TGATGATTGT GATCTTTTGA AGAATCGATT ATTAGAAATT
GGTGAGACTC TCACTAATTG TCAAAAGAAC GAAAATCAAC TCATAAATAA GCTAGACAAT
CTTAGATCTC AGCTAAGTAA ATTAGAACAA GAGAAAGCTG CACTTGATGC TGAAAGAGTA
ACTTCTAAAA GATCAAATTC ACCGTTATTA GAACGCCAAA GCCATCGCTC AAAAAGAATT
AGCGATCTTC AAAAATCTAA AAAAGAAAAA CTATGTCAAT TAGAATCTAT TAATTTGATT
ATTAAACCTT TAGAGGTCAT TTTATTAGAA ATTGAGAAGG AAGAGAAAAC AATAGATAAA
TCAAGTGACT CATCTGTTTG GTCTAAATTG CAAAATGATT TAGAAGAGGC TGATAAAAAT
CTTCTTTCTT TTAGGAATAA AAGAGATGAG ATTTCAAATA AGCAATCTCA AAATAAGCTT
GCAATTGATC GATTAAATGA TCAAGAAACT GCTTTAATAA GCGAAGAAAA ACGATTAAAG
GATTCCATAG ATACGCTTGC TTCTTCTCAT ATCGCTTGGC GTGAGCAAAG CAAACTACTT
AATACAAATC GGCAAGATTT GATCAATCAA CAAAAAGATT TAGAAACTCG CTTTGGGGAA
CAACGAAGAG AAAGAGATTG TGTGGAAGCA GATGTAGCTA AAAAAAGATT GAATTTACAA
GAAATGCAAT GGAGTCTCCA ACGTTTAATG GAAGATCAAA AAAACATGAA GGAAGAGATA
CGAATGGAAA CTATTCGATG TACTGAATTA GAGAGGAAGC TTCCTAATCC TAGGCCTTTG
ATTTCAGATG AAATAAGAGA TAATGGTTTG GATGATTTAC TTTCTAAATT GGAAGATTTA
CAGAAAAGAA TGGAGGAATT GGAACCTGTC AATATGCTTG CATTGGAAGA GTTGGCTAAA
TTAGAAGAGA GACTGAATGA ACTTGAAAAT AGACTTCAGG TTCTAACTGA TGAAAGATCG
GAGTTATTAC TTCGAATAGA GACAGTTGCA ACGTTAAGAG AGGAGGCCTT TATGGAGGCT
TTTAAGGCGG TTGATGTACA TTTTCGTGAA ATCTTTGCAA GTCTTTCTGA AGGAGATGGA
CATTTGCAGC TTGAAAATCC TGAGGAGCCT TTGGAGGGTG GCTTGACTTT GGTTGCTCAT
CCAAAAGGTA AGCCTGTAAG ACGGCTTGCG GCTATGTCAG GTGGAGAAAA ATCTTTAACA
GCTTTGAGTT TTCTTTTTGC CTTGCAACGT TTTAGACCCT CTCCTTTTTA TGCCCTTGAT
GAAGTAGATA GTTTCTTGGA TGGAGTAAAT GTTGAAAGGT TAGCGGCCTT AATTGCTCAA
CAAGCTGAAC AGGCACAATT TCTTGTCGTA AGTCATAGAA GACCTATGAT TGGAGCATCA
ATGAGGACTA TTGGGGTTAC ACAAGCAAGG GGAAATCATA CTCAAGTTGT TGGGTTGCCA
ATCGCAGCTT GA
 
Protein sequence
MSIPLEDGFT VVTGPNGSGK SNILDGVLFC LGLANSRGMR ADRLPDLVNS GVLKAGKSSE 
TKVTVKFDLT DWKPDEAEEG IEPTEEGPWI KHDQKEWTVS RRLKVMPGGS YASTYSADGE
TCNLQQLQTQ LRRLRIDPEG SNVVMQGDVT RIVSMSNKDR RGLIDELAGV ALFDTRIDQT
RAKLDDVYER QERCRIVEQE LILSKQRLQK DCEKASLYKD LKNQLLIGRQ QELVLSYEKA
KKGLEKLDID HQELLKKEKI DSEKLLNHEN DLSKCIEKLN ILQKNVKELG EDQLLEVQGK
LAGIESQHRE LERQGLNHKN EGEKLQESRN NLLQKKKDYQ TDLQSKLNEI NPEELEEADL
RCKEAEAWVE SSRRKLSDVA GRSGAWIEKH QKARDELNKI RLELDPKRLE KQNIEESLLQ
LNVILKELET DQKADQSSNE KVHIEISNLN KKWDSILDLL SVKKEEFQVL VSEKDIQERT
KYRLEKEQVK LQNDIARLES RKEMISESRG TNAITLLLES GLEGIHGPVA NLGEVEDRYR
IALEVAAGAR LGQVVVDSDQ IAAKSIDLLK RKRAGRLTFL PLNKILKNSQ SRSDVFQRSV
HTNFNKSTGL IGKAIDLIQY DSIYKNVFLY VFGETIVFSD LSSARDQIGI KRAVTLEGEL
LEKSGAMTGG SLNNRALGLS FGRVKDNDDC DLLKNRLLEI GETLTNCQKN ENQLINKLDN
LRSQLSKLEQ EKAALDAERV TSKRSNSPLL ERQSHRSKRI SDLQKSKKEK LCQLESINLI
IKPLEVILLE IEKEEKTIDK SSDSSVWSKL QNDLEEADKN LLSFRNKRDE ISNKQSQNKL
AIDRLNDQET ALISEEKRLK DSIDTLASSH IAWREQSKLL NTNRQDLINQ QKDLETRFGE
QRRERDCVEA DVAKKRLNLQ EMQWSLQRLM EDQKNMKEEI RMETIRCTEL ERKLPNPRPL
ISDEIRDNGL DDLLSKLEDL QKRMEELEPV NMLALEELAK LEERLNELEN RLQVLTDERS
ELLLRIETVA TLREEAFMEA FKAVDVHFRE IFASLSEGDG HLQLENPEEP LEGGLTLVAH
PKGKPVRRLA AMSGGEKSLT ALSFLFALQR FRPSPFYALD EVDSFLDGVN VERLAALIAQ
QAEQAQFLVV SHRRPMIGAS MRTIGVTQAR GNHTQVVGLP IAA