Gene PMN2A_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1336 
SymbolnusB 
ID3606731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp11363 
End bp11989 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content30% 
IMG OID637688212 
Producttranscription antitermination protein NusB 
Protein accessionYP_292528 
Protein GI72383173 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAA AATCAATTTC CAGAGAGTTA GCTCTTTTAC TTTTAGGACA AATTAAAAAA 
AAAGATATTA ATAAATTAAA TATTGAAAGT TTACTTAGTA AAGCAATTGA ATCTTTAACT 
CAACATTGGC GAGAACAATT AGATTCATGT GCATCGCAAT TAGAAAAAGC CAATCAGGAA 
TTATTGGATA GTGAATTTCA AGTAGATGCG GGATTGTTAA TAAAATCTCA AAATCATTTG 
AAAACTTGTT TGATTGACTC AGAAAATATA CTTAATTGCT TGTCTGAAAG TATCGAATTA 
CCAAGATTAC TAGCGTTAGT TGATCAAAAA GAAATACGTG AGTTAGCTCT TAGGCGTGTT 
GATTTAGTTA TTGAAAAGCA AGATGAGATT GATCATAAGC TTGATAGCGT TATGGAAGGT 
TGGCGTTTAA AAAGGTTACC TAGAATTGAT AGCGATATTT TGAGATTGGC ATGGGTTGAT 
TTAATAGATT TTAATACTCC TATGGCTGTT ACTTGTAATG AAGCTGTAAA TTTGGCTAAT 
CGTTATAGCG ATGAACAAGG ACGAAGAATG ATTAATGGAG TTTTAAGGAA ACTTCAAAAT 
TCTGCTTTGA TACTAAACTT GAAATGA
 
Protein sequence
MQLKSISREL ALLLLGQIKK KDINKLNIES LLSKAIESLT QHWREQLDSC ASQLEKANQE 
LLDSEFQVDA GLLIKSQNHL KTCLIDSENI LNCLSESIEL PRLLALVDQK EIRELALRRV 
DLVIEKQDEI DHKLDSVMEG WRLKRLPRID SDILRLAWVD LIDFNTPMAV TCNEAVNLAN 
RYSDEQGRRM INGVLRKLQN SALILNLK