Gene PMN2A_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1236 
Symbol 
ID3606629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1737228 
End bp1738262 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content29% 
IMG OID637688111 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_292429 
Protein GI72383074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.443821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTT TTCCTGAAAA TATAAATTCT ATCCTAATTA CAGGAGGGTC TGGTTTTATA 
GGTACTAATC TTATTTCTAG ATTACTACGA GAGACAACCT TGAAAATATA TAATTTAGAT
AAAATAAATT ATGCAAGTAA CCTTAAAGTT TTTGATGAGC ATATCGATTC AAATAAATAT
CATTTTCTTA ATGTTGATTT GTTCAATATA GAAGATACAA AAAATGCAAT AAGATTTAGT
AATCCAGATT TGGTTTTTCA TTTAGCAGCT GAAAGTCATG TAGATAAATC AATTTCTAAA
CCTAAAGATT TTCTTGATAG TAATATAATC GGAACTTTCA ATTTATTACA AGAATTACGA
ACTCATTGGG AATTAATGTC TATAAATAGA CAGAATAGCT TTAGACTTAT TCATGTAAGC
ACAGATGAAG TTTTTGGATC AATTAAAGAA GGCTTTTTCT TTTCAGAGAC AACTTCATAT
GATCCAAGAA GTCCATATTC TGCTACAAAA GCTGCTAGTG ATCATTTAGT AAAAGCTTGG
AGCAACACCT ATGGATTTCC GGCAATTATT ACTAATTCCT GTAATAATTT TGGACCATGG
CAATATCCTG AGAAATTAAT ACCAGTGATT ATAAATAATG CTTTAAATAG TAAATCCATA
CCGCTTTACG GTAACGGACA GAATGTTCGA GATTGGATAT TCGTAGAGGA CCACGTGGAT
GCATTAATTC AAGTAATGTT AAAAGGTAGA TTGGGAGATT CATATTGTAT AGGTAGTAGA
CAACTAAAAA CGAATGAGGA GATAGTTAAC ATTGTCTGTG ATTATTTGGA TTTATATAAA
AAAAGTAATG CACCACATAT ACGATTTAAA AAATTTGTTA AAGACAGAGC CGGACATGAT
CTTAGATATG CGATAGATAA TAATAAAATA ATTAACGAAT TAAAATGGTC TCCTAAATAC
GATTTTTATG AGGCTATAGA TTTTACAGTG AGATGGTACC TAGATAATCA GAACTTTTTG
AGTATTAGTG ATTAA
 
Protein sequence
MNLFPENINS ILITGGSGFI GTNLISRLLR ETTLKIYNLD KINYASNLKV FDEHIDSNKY 
HFLNVDLFNI EDTKNAIRFS NPDLVFHLAA ESHVDKSISK PKDFLDSNII GTFNLLQELR
THWELMSINR QNSFRLIHVS TDEVFGSIKE GFFFSETTSY DPRSPYSATK AASDHLVKAW
SNTYGFPAII TNSCNNFGPW QYPEKLIPVI INNALNSKSI PLYGNGQNVR DWIFVEDHVD
ALIQVMLKGR LGDSYCIGSR QLKTNEEIVN IVCDYLDLYK KSNAPHIRFK KFVKDRAGHD
LRYAIDNNKI INELKWSPKY DFYEAIDFTV RWYLDNQNFL SISD