Gene PMN2A_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1235 
Symbol 
ID3606628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1735848 
End bp1736816 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content27% 
IMG OID637688110 
Productputative nucleoside-diphosphate sugar epimerase 
Protein accessionYP_292428 
Protein GI72383073 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.747761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACAGTT TTACTCCAAA AGATAAAAGA ATTTTCATAA CTGGTGGTAC TGGCTTCTTA 
GGTAGAAGTC TTATTGAAAG GTTATATAAA AAAAATGAAA TTATCATATA CTCTAGAGAC
GAGGCAAAAC ATCATTTTTT AAAGGAAAAA TATCCAAATG TTCATTTTAT TCTAGGAGAT
ATCAGAGATA AAGAATTATT AAATAGATCA GCTAAAGGTG CAAATATTGG AATTTTTGCT
GCAAGTCTAA AGCAAATTAG TTCATGTGAT CAGAACCCAG AAGAAGCTTT ACAAACAATA
GCTAATGGCG CTATCAATAG TAAACATATA GCAATTGAAA ATAAATTTGA TAGCGCTATA
TTTATCAGCT CTGATAAAAG CAGAGCTGCG ACAACTATAT ATGGTAGTTT GAAGTATTTT
GCAGGTGAAC AATTCATACT CAAGAATAAT TATGAAAGAC ATTCTAGTAC AAATTTATCT
ACAGTTATCT ATGGAAATGT GCTTAATTCT ACAGGTAGCA TTATTCCAAT GATTTGGAAA
TCAATAAATT CAAATACAGA ATTAACTTTG TTTTCTAAGA AAATGACAAG ATTTATTATT
GATGTTGATC AAGCAATTGA TTTAATCTTT GAAGGAATTT CATACGATCA AGCATCACTT
ATTCCTAAAT CAAAAAGTAT TAAAGTTTTA GATTTGTTTG AGATATATAA AGAAAATTTT
AACTTAAAAT TTAATATAGG TTATCCAAGA ATTGGAGAAA AGATTCATGA GGTTTTAGTT
ACACAAGAAG AAATGTCAAG GTTATCCAAT TCAGATTGTG GGACTTTTTA TATCTTAAAA
CCTTTTCGTA CCAAATTTAA ATCAGATTGT ACTCAATTAA GAAATGATAG TTATAGCTCA
AAAGATTGTT TAATTTCGAA ATCAGAACTT AATAAAATTC TAAATAAATT TAATTATTTT
AAGCCTTGA
 
Protein sequence
MYSFTPKDKR IFITGGTGFL GRSLIERLYK KNEIIIYSRD EAKHHFLKEK YPNVHFILGD 
IRDKELLNRS AKGANIGIFA ASLKQISSCD QNPEEALQTI ANGAINSKHI AIENKFDSAI
FISSDKSRAA TTIYGSLKYF AGEQFILKNN YERHSSTNLS TVIYGNVLNS TGSIIPMIWK
SINSNTELTL FSKKMTRFII DVDQAIDLIF EGISYDQASL IPKSKSIKVL DLFEIYKENF
NLKFNIGYPR IGEKIHEVLV TQEEMSRLSN SDCGTFYILK PFRTKFKSDC TQLRNDSYSS
KDCLISKSEL NKILNKFNYF KP