Gene PMN2A_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1219 
Symbol 
ID3606612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1705014 
End bp1706393 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content31% 
IMG OID637688094 
Productputative ABC-type polysaccharide/polyol phosphate transport system ATPase component 
Protein accessionYP_292412 
Protein GI72383057 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.179515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAT TTAACTCTAA TGAACTGCAG AAGCTATATA TCGCATTTTT TGGTAGACCA 
TGTGATCCTG CGGGAATGAA TTACTGGTTA TCAAAATCAG AAGATAAAGC AAATTTAATT
GATGTCGCAA AGGCTTTTTC ATCACAAGAG GAGTATAAGA AAAGTTTAAC ATCTGTGAAT
TCTATAGAGT TTCAAATTAA TCAAATTTAC TTGAATTTAT TTGCAAGAAA AGCAGATTTT
GATAGTTTAA ATACTTGGTC TTTAAAGTGT AAAAGAGGTG AATTAAAGAT ATACGAATTA
GCATCTATGT TGACTATTGA GCAGTCTAAC ATTGAAGAAA AAATTGATAA TATTTCTTTG
AAGGATGTTG AAGTCCTAGA AAAAAAAGTA CAAGCTGCTC AATTATTTAC CGATCAAATA
AGTAAAGATA TTTGTTGGAT AAATGCATAT AAGCCAGATT CTATTGATCC TTGGATCTTA
GGGAAAGCTC TTCAAGTCGG TATAAATTAT CTGAACAAAG TCGATTCAAG TTATCATTTG
GATAAGTATG CCGTTACAGA AATACTTCAT AAGATGAGCT TTGAGAAAAT TAATACATCA
ACAAAAGCAA TAATAAAAAT TAGAAACTTA TCTCTAACAA TTCCAATTTC TTTTAAACAC
GATCAAAAGT TATCTAATCT TTTAACAAAA GGTGTTTTAA ACTCTATTAT TGGTGGTCAA
TTAGTCAAAA ATAAAACAAC TACAAAAATT GAGGCTTTGA GAAATATAAA TTTGACAATT
ATGAATGGAG AAAGAGTTGC GTTAATTGGT CATAACGGTT CAGGCAAGAC TAGCTTCTTA
AAGGTTATTT CTGGTATTTA TTTACCTACA GAAGGTGATT TAGATGTTGA AGTCGATGTG
TATCCCATGC TTCAAAAAAG TTTTTTAACA AGTACAGATC TCACTGGCGT TGATGCAGCC
AAGGCACATT ATTTGCTAGT AAATAAAAGT TTAAATGGTT TTGATCAATT TCTTCAAGAT
ATTATAGAAT TTTCTGGACT AGGTGAGTTT ATTTCACTAC CAATTAAAAC TTATAGTGAA
GGAATGAGTG CTAGATTAAT TTTTTCAATT TTGACATCCA TACCCCATGA TTGTTTAGCA
ATAGATGAAG GATTTGGGAC TGGAGACTCT GATTTCTTTG AAAGGGCTGA GAAACGTATG
AAATCATTTA TGAATTCTTC AGGGACTCTT ATACTTGCAA GTCATTCTGA ACATCTTTTA
AAACAATTTT GTACAAGAGG TATTGTATTT AACCATGGGC AAGTTGTTTA TGATGGCTCA
CTAGATGCTT CATTAAATTA TTATCACACT CATGATTATA TCCACAGCAA TGATAATTGA
 
Protein sequence
MTSFNSNELQ KLYIAFFGRP CDPAGMNYWL SKSEDKANLI DVAKAFSSQE EYKKSLTSVN 
SIEFQINQIY LNLFARKADF DSLNTWSLKC KRGELKIYEL ASMLTIEQSN IEEKIDNISL
KDVEVLEKKV QAAQLFTDQI SKDICWINAY KPDSIDPWIL GKALQVGINY LNKVDSSYHL
DKYAVTEILH KMSFEKINTS TKAIIKIRNL SLTIPISFKH DQKLSNLLTK GVLNSIIGGQ
LVKNKTTTKI EALRNINLTI MNGERVALIG HNGSGKTSFL KVISGIYLPT EGDLDVEVDV
YPMLQKSFLT STDLTGVDAA KAHYLLVNKS LNGFDQFLQD IIEFSGLGEF ISLPIKTYSE
GMSARLIFSI LTSIPHDCLA IDEGFGTGDS DFFERAEKRM KSFMNSSGTL ILASHSEHLL
KQFCTRGIVF NHGQVVYDGS LDASLNYYHT HDYIHSNDN