Gene PMN2A_1193 details

Gene Information

• Locus tag: PMN2A_1193
• Symbol: smpB
• ID: 3606586
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 1682562
• End bp: 1683059
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637688068
• Product: SsrA-binding protein
• Protein accession: YP_292386
• Protein GI: 72383031
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAA AAGGAAAGAA ACAATCCAAA AACAATTCCT CAGTTGATGG AAATCGTCGC 
TTAGCAGAAA ATCGACAAGC AAGATATGAA TATGAAATCC TAGAAACACT TGAAACTGGA 
TTAGAGCTTC TTGGAACAGA AGTTAAATCA ATTAGAGCTG GAAAAGTAAA TTTAAAAGAT 
GGATTTTGCC TAATCAAAAA AGATCAAATT CAACTTCATA ATGTTCATAT ATCGCCTCAT 
AATCATGCCG GTAAATTTTT CAATCACGAA CCTCTGAGAA TCAAAAGACT TCTTGCACAT 
CGAAAAGAAA TCGAGAAATT AAAAATAAGT TTAGAAAGAA AAGGTTTAAC AATAATCCCT 
TTAAGTCTTT ATCTAAAAGG CTCATGGATC AAATTAAAAA TAGGAGTCGG TAAAGGAAGG 
AAGATTCATG ACAAAAGAGA TCGAGAGAAG ATCAATGACT CCAAAAGAGA TGTAGCTAAT 
GCTCTAAAAC GTTTTTAA 

 

Protein sequence

MSKKGKKQSK NNSSVDGNRR LAENRQARYE YEILETLETG LELLGTEVKS IRAGKVNLKD 
GFCLIKKDQI QLHNVHISPH NHAGKFFNHE PLRIKRLLAH RKEIEKLKIS LERKGLTIIP 
LSLYLKGSWI KLKIGVGKGR KIHDKRDREK INDSKRDVAN ALKRF