Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1100 |
Symbol | prfA |
ID | 3606488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1600518 |
End bp | 1601615 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637687971 |
Product | peptide chain release factor 1 |
Protein accession | YP_292293 |
Protein GI | 72382938 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.986414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCTT CAACCCTAAT TAAACGATTA GAAACAGCTA AAAGTAGTTT TCAAAACTTG GAGTTGCAAT TAGCTGATCC AGATGTTGCA TCAGATCCAA AACAATTAGA GACAATTGCT AGAGAAAGAT CCCGTTTAGA GCCTTTGGTT AATGATTATT TAAAGCTCCA GATAATAGAA AAAGAGTGTC TAGAAGCTAA AGGATTAGTA AAAGAAAGCA GAGATGATAA AGAGATGGAA CTTTTAGCTA GAGAAGAACT TCAAAATCTC GAACTCTCAA AAAATGAATT AATTCAAAAG TTGACTTTGG CTCTTTTACC CAAAGATCCA AGAGATGAAA GAAGTGTGAT GCTTGAAATC AGAGCTGGAG CAGGAGGGAA TGAAGCTTGT TTATGGGCTG GTGATTTAGC AAGAATGTAT GAAAGATATG GTCAAAAACT TGGATGGAAT GTAAAACCTA TAAGTTCAAC AGAAGCTGAT ATGGGCGGTT TTCGTGAAAT GATTATCTCT GTCAAAGGGG AGTCTGTTTA CAGCCAATTA AAATTTGAAG CAGGTGTTCA TAGAGTTCAA AGAGTCCCTT CAACTGAATC TCAAGGACGA GTTCATACCT CTACTGCAAC TGTTGCTGTA ATGCCAGAAG CTGATCCAGT AGAGGTGAAA ATAGAATCTA CCGATCTAGA AATTAGTACG GCAAGATCAG GTGGTGCTGG CGGGCAAAAT GTAAATAAAG TAGAAACCGC TATTGATTTA TTTCACAAGC CCTCAGGTAT AAGAGTTTTT TGTACGCAAG AACGTTCTCA AATGCAAAAT AGAGAAAGAG CAATGGAGAT TTTAAGAGCT AAATTATTAG AACTAGAACT AGCAGAGGCT AATGCAAAGG AAAGATCTGC TCGATTGTCT CAGGTTGGCA CAGGTGATAG AAGTGAAAAG ATTAGGACAT ATAACTACAA AGATAATCGA ACAACTGATC ATCGATTAGG AGTTAATTTC CCCCTTGAAC AAGTTCTTTC AGGTCAATTG GAAGATGTCA TAGGTGCATG TATTGCAGAA GAACAAAAAA GGCAAATGGA AGAGCTTAGT AATCAATCTG AAGATTAA
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Protein sequence | MDSSTLIKRL ETAKSSFQNL ELQLADPDVA SDPKQLETIA RERSRLEPLV NDYLKLQIIE KECLEAKGLV KESRDDKEME LLAREELQNL ELSKNELIQK LTLALLPKDP RDERSVMLEI RAGAGGNEAC LWAGDLARMY ERYGQKLGWN VKPISSTEAD MGGFREMIIS VKGESVYSQL KFEAGVHRVQ RVPSTESQGR VHTSTATVAV MPEADPVEVK IESTDLEIST ARSGGAGGQN VNKVETAIDL FHKPSGIRVF CTQERSQMQN RERAMEILRA KLLELELAEA NAKERSARLS QVGTGDRSEK IRTYNYKDNR TTDHRLGVNF PLEQVLSGQL EDVIGACIAE EQKRQMEELS NQSED
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