Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1094 |
Symbol | |
ID | 3606481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1593829 |
End bp | 1595886 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637687964 |
Product | TPR repeat-containing protein |
Protein accession | YP_292287 |
Protein GI | 72382932 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTTT CTAGTCAAGA TGGAGAAGTA AAGAAAAAAG TCACTGAAAT AAAAACATTC TCCGTTCCAT TTGCTTTAGG AGAAATCAAA AAAAATATTA CTATTACTAC GAACACTCCT TCCAAACCGT CTAAAGAACA AATAATTAAT CAAGCATTGA AGTTTCATTC ACAAGGCAAT ATTTCAGAAG CAGCAAAACT TTATCAATAT TTTATTGATA AAGTTTTCAA AGATCACAGG GTTTTTTCTA ATTATGGAAT AATTTTAAAA AGTCTAGGCA AATTACAAGA AGCAGAATTA TCTACTCGCA AAGCAATTGA AATTAAACCT GATTACGCAA AAGCGCATTT AAATCTGGGA ATCATATTGA GTGATCTTGG TAAATTAGAA GAAGCAGAAT TGTCATACCG CAAAGCAATT GAACTGAATC CTGATTTCGC AGAAGCACAT TACAATTTGG GAATCATATT GAGTGATCTT GGCAAATTAG AAGAAGCAGA ATTGTCATAC TGCAAAGCAA TTGAACTTAA CCCTAATTTC GCAGAAGCAC ATTCCAATCT GGGAAACATA TTAAAAGATC TTGGCAAATT ACAAGAAGCA GAATTGTCAT ATCGCAAAAC AATTGAACTT AATCCTGATT TCGCAGACGC TCATTACAAT TTGGGAGTCT TATTGAAAGA ACTAGGCAAA TTAGAAGAAG CAGAATTGTC ATACCGCAAA GCAATTGAAC TGAATCCTGA TTTCGCCAAT GCTCATTACA ATCTGGGAAT CATATTGAAA GATCTTGGCA AATTAGAAGA AGCAGAATTG TCATGCCGCA AAGCAATTAA AATCAAACCT GATTACGCAG ACTCTCATTA CAATTTGGGA GTCTTATTGA AAGAACTAGG CAAATTACAA GAAGCAGAAT TGTCATACCG CAAAGCAATT GAACTTAATC CTGATTTCGC CAATGCTCAT TACAATCTGG GAATCATATT GAAAGATCTT GGCAAATTAG AAGAAGCAGA ATTGTCATGC CGCAAAGCAA TTAAAATCAA ACCTGATTAC GCAATAGCAT ACTATTCAAT ATCATTAATT AAATATTCTG ATGAGAATAA TATATGGCAG GATCAACTCT TTTCTAAAAA TATCTTAATT AATAAATCCC AAGAAGATCA AGTTTATATT TACTTTGCAA GAGCAAATAT TCTTCATAAG GAAAAACAAT ACGAAGAGAG TTCTACATAT CTTGATTTGG CGAATGAATT AAAACTTGCT ATTAAACCAT CTGAATCTAA TAAGTTATTA AGTAAGTCTC AGGCATTATT TATTGAATCT AATAAAAATG AAATTAATAA AAAAGAACCC AGAAATTCTC CTGAGAGTAT TTTCATTGTC GGAATGCCTA GAAGTGGTTC TACATTATTG GAATCAATTC TTAGTATGAA CAATGAAGTA TGTGATCTAG GTGAAATTAA TATTCTAGAG GAATCTTTTC TAGAGTATAA GAAGTCTAAA AAAGATGCAA ATTTTGCTGA ACTTTATGGG GAAAAAGTAA ATAATCATAC TGAGTTGAAC ATTGCAACTA ATAAAAACTT ATATAATTAT CAATACACAG GTATTATTGC TAAAAGAATA CCAAACGCAA AAATTATTCA CTGCTATAGA AATCCTTTAG ATAATATTCT TTCAATTTAC CGAACACATT TTGCTAAAGG AAATGAATAT TCCTCATCCC TAGTTGATTG CGTAAGAATT TATCTAGATC AAGAAGAAAT TATGACTCAA TATAAGAATA GATTTAAATC AACAATTTAT GACTTAAATT ATGACTCATT AGTTAGCAAT CCAAATAAAG AAATCAAATC TTTGATCTCT TGGTTAGGTT GGAAATGGGA AGATAAATAT CTATCGCCTC ATCTTAATCC ACGCTCAGTT TCAACAGCAA GCAATGTTCA AGTTCGTTCC CCAATTAATT CAAAATCAAT TGGTGGATGG AAGAACTACA AAGATATGCT GAAACCTGCT ATTGAAATCC TTACTCAAAC TGATAGATAT CAAGACATAA CCTTATAA
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Protein sequence | MDLSSQDGEV KKKVTEIKTF SVPFALGEIK KNITITTNTP SKPSKEQIIN QALKFHSQGN ISEAAKLYQY FIDKVFKDHR VFSNYGIILK SLGKLQEAEL STRKAIEIKP DYAKAHLNLG IILSDLGKLE EAELSYRKAI ELNPDFAEAH YNLGIILSDL GKLEEAELSY CKAIELNPNF AEAHSNLGNI LKDLGKLQEA ELSYRKTIEL NPDFADAHYN LGVLLKELGK LEEAELSYRK AIELNPDFAN AHYNLGIILK DLGKLEEAEL SCRKAIKIKP DYADSHYNLG VLLKELGKLQ EAELSYRKAI ELNPDFANAH YNLGIILKDL GKLEEAELSC RKAIKIKPDY AIAYYSISLI KYSDENNIWQ DQLFSKNILI NKSQEDQVYI YFARANILHK EKQYEESSTY LDLANELKLA IKPSESNKLL SKSQALFIES NKNEINKKEP RNSPESIFIV GMPRSGSTLL ESILSMNNEV CDLGEINILE ESFLEYKKSK KDANFAELYG EKVNNHTELN IATNKNLYNY QYTGIIAKRI PNAKIIHCYR NPLDNILSIY RTHFAKGNEY SSSLVDCVRI YLDQEEIMTQ YKNRFKSTIY DLNYDSLVSN PNKEIKSLIS WLGWKWEDKY LSPHLNPRSV STASNVQVRS PINSKSIGGW KNYKDMLKPA IEILTQTDRY QDITL
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