| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1047 |
|---|
| Symbol | |
|---|
| ID | 3606434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1541399 |
|---|
| End bp | 1542556 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637687917 |
|---|
| Product | putative urea ABC transporter |
|---|
| Protein accession | YP_292240 |
|---|
| Protein GI | 72382885 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.697374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACTTT TACTTGAAAG TCTCTTTAAT GGCGTTGCTA TTGGCTCAGT TTTGCTTGTC
GCAGCACTGG GACTGGCAAT TGTCTTCGGT TTGATGGGTG TCATTAATCT TGCTCATGGC
GAATTGATGA TGCTTGGCGC TTATTCCACA TACATAACTC AATTAATTTT TAAACAAGTT
TCTTTTTTAA AACCTTTTTA TGATTCGTAT GTCATAGTTG CAATTGGGAT TGCTTTTTTA
GTTAGTGGAA CAGTTGGGAT TCTTTTAGAA CGAACAGTTA TTAGACGTCT CTATGGAAGT
CCTCTTGAAA CACTTTTAGC TACATGGGGA GTTAGTCTAA TCCTTCAACA ATTTGTTAGA
AGTGTTCCTC TCGCTTATGC AAGTGGTTTG GTTGTAGCAC TATTCTTTGG ATTATTTTCA
CCATTATTTA TTTCTGATGA CTTACTTTCT GGTGCAAAAG GTAAATTAAT AAGGGCATGC
ACGTGGGGAT TTTCTGCATT AATAGGTGTC GCAACAGGAG GTATTTTATC TTCGTTAGTA
AGTAAACTTA GTCGTGCAAG TGCAAGGAAC GTTGATGTTA CTGCTCCTTC TTGGATGAGA
GGTGGTATAG ATTTTGTTGG AATTACTTTC CCTAAAACAC GTTTATTAAT AATCCTTATC
ACTGTAATAT CTGTTTTAGT AGTGATTTTC TTTCTCGATA AAACAGCGTG GGGAATGAGA
ATAAGAGCAG TAACTCAAAA TAGACCTATG AGTGATTGTT TAGGTATATC AACAGAAACA
GTAGATATTA TTACTTTTGG AATTGGCTCT GGTCTTGCTG GAGTTGCTGG AGTTGCTGTT
TCACTTCTAG GGTCAGTAGG ACCAAATGTT GGCGGAAATT ATATTGTGGG ATGTTTTATG
GTTGTCGTTC TTGGTGGAGT AGGTAATTTG CTAGGCACAA TTCTTGCTTC TTTCTCTATA
GGAATTATGA CTGATTTAAT TGGAGCAGGG AGACTCCTTA CCATTTGGCC AGATATGCCT
TCACCTCTAG CATCAACAAT AGATTTTTTT GCGACAACAA GTATGGCTAG AGTAATGATA
TTTGCACTAA TAGTCATATT CTTGCAATTT CGACCAACTG GGATGTTCCC TCAAAAAGGA
AGAATGGTGG AGTCTTAA
|
|---|
| Protein sequence | MQLLLESLFN GVAIGSVLLV AALGLAIVFG LMGVINLAHG ELMMLGAYST YITQLIFKQV
SFLKPFYDSY VIVAIGIAFL VSGTVGILLE RTVIRRLYGS PLETLLATWG VSLILQQFVR
SVPLAYASGL VVALFFGLFS PLFISDDLLS GAKGKLIRAC TWGFSALIGV ATGGILSSLV
SKLSRASARN VDVTAPSWMR GGIDFVGITF PKTRLLIILI TVISVLVVIF FLDKTAWGMR
IRAVTQNRPM SDCLGISTET VDIITFGIGS GLAGVAGVAV SLLGSVGPNV GGNYIVGCFM
VVVLGGVGNL LGTILASFSI GIMTDLIGAG RLLTIWPDMP SPLASTIDFF ATTSMARVMI
FALIVIFLQF RPTGMFPQKG RMVES
|
|---|
| |