| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0997 |
|---|
| Symbol | fumC |
|---|
| ID | 3606383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1486955 |
|---|
| End bp | 1488349 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637687866 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_292190 |
|---|
| Protein GI | 72382835 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACA TGAAACGACT TGAGAAAGAT AGCCTAGGTT CAATTGATGT TCCAAATGAT
GCGCTATGGG GAGCTCAAAC TCAACGCTCA ATATTGAATT TTGCTATCGG GAATGAGGTC
ATACCACTCG AGATTATTTT TGCAATTGCC CAAATAAAAG CCTCTGCTGC TCATGTAAAC
AATCATCTAG GTTTAATAAC TACAGAAACT GCTCAATTTA TTACCGAAGC AAGTTTAGAA
ATTATTGAAG GAAAACATAA TGATCAATTC CCAGTGAGAG TTTGGCAAAC AGGCAGTGGT
ACTCAAACAA ATATGAACGT CAATGAGGTG ATCAGCAATA TAGCTTCAAA ACGTTCAAAT
AATACGTTAG GTAGTCATAA GCCAATACAT CCCAATGATC ATGTCAATTG CTCTCAATCA
ACAAACGATG TTTTTCCAGC TGCAATCCAA ATAGCCACAA TAGTCACCTT AAAAGACACA
TTAATACCTG AATTAACCAA ACTCATTGAT GTATTCCATC AAAAAAGTAA AGAATGGAAA
GATATTATAA AAATAGGACG TACCCATCTT CAAGATGCAG TACCTCTAAC TCTTGGACAA
GAAGTCTCTG CTTGGGCTTC TCAATTAGAG ACTGCTTTAA AACGCATTGA AATCAACATC
GAGGAACTTT ATCCGCTTCC ACTTGGAGGA ACCGCTATTG GTACAGGGAT TAATACTCCT
AAGGATTTCG ATAATTTAAT CGCTCTTGAA ATAGCCAAAC AAACAAATTT ACCTTTTAAA
ACTGCAGCTA ATAAATTTGC CATCATGGCT AGTCATGATG GTCTTGTAAA TATAATGTCT
CAAATAAAAT TACTAGCCGT CACTTTTCTC AAAATTGTTA ATGATCTTCG ACTTTTATCT
TGTGGACCAA GAGCTGGATT ATCAGAACTA CAGCTTCCAG CCAATGAACC TGGTAGCTCA
ATAATGCCAG GGAAAATTAA TCCTACTCAA TGCGAAGCCA TGGCAATGGT GTGTACGCAA
ATAATTGGCA TGGACACCTC AGTATCGATC GCAGGAAGTG GAGGACATCT ACAAATGAAT
GTCTATAAAC CACTGATTGG CTACAACATT ATAACAAGTA TCAACCTTAT TCAAAATGCC
TGTAAGAGTT GCAGAGAGAA TATGATTGAA GGTATTCAAC CTAATAAAGA AAAAATCAAA
CAATTTCTAG ACAATTCTTT GATGTTGGTA ACCGCCTTAT CTCCATCAAT AGGATACGAA
AAAGCAAGTA AAATTGCTCA ACTAGCCCAT GAAAAGAATC TAAGTCTAAG ACAAGCTTCC
AGTCAATTAA ATTATCTTGA TCAAGAAGAA TTTGATAAAC TCATGAGTCC AAAATCAATG
ATTGGAAGTG ATTGA
|
|---|
| Protein sequence | MSNMKRLEKD SLGSIDVPND ALWGAQTQRS ILNFAIGNEV IPLEIIFAIA QIKASAAHVN
NHLGLITTET AQFITEASLE IIEGKHNDQF PVRVWQTGSG TQTNMNVNEV ISNIASKRSN
NTLGSHKPIH PNDHVNCSQS TNDVFPAAIQ IATIVTLKDT LIPELTKLID VFHQKSKEWK
DIIKIGRTHL QDAVPLTLGQ EVSAWASQLE TALKRIEINI EELYPLPLGG TAIGTGINTP
KDFDNLIALE IAKQTNLPFK TAANKFAIMA SHDGLVNIMS QIKLLAVTFL KIVNDLRLLS
CGPRAGLSEL QLPANEPGSS IMPGKINPTQ CEAMAMVCTQ IIGMDTSVSI AGSGGHLQMN
VYKPLIGYNI ITSINLIQNA CKSCRENMIE GIQPNKEKIK QFLDNSLMLV TALSPSIGYE
KASKIAQLAH EKNLSLRQAS SQLNYLDQEE FDKLMSPKSM IGSD
|
|---|
| |