Gene PMN2A_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0909 
Symbol 
ID3606294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1410582 
End bp1412885 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content35% 
IMG OID637687778 
Productimport-associated channel, putative chloroplast protein IAP75 
Protein accessionYP_292103 
Protein GI72382748 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAA GACACGCAAG TTCTAATAGA AAATTAATAG GCAGAGCTGC ATATGCCATT 
GCTTTCGCAT TCCCTTTTAT CAGCCTTTTT GGAGAGACTA AAGCCTCTAA GATAGTCTCA
AGTGAAAATC AATTGTTTGT TCAAAATAAG CAGAGTAAAA GATTACAATT TAGTGATCAA
TTAAATCCTA ATAAACTTAA TTTAAATTTC GATAATTTTT TGATTTCTGA GGGGGAAAAT
CAAAAAGATG AAAATATTGT TGTTGAAGAA AAAAGAGTAT TAATTTCAGA GATTGTTATT
GAGGGACTTG AAGATCATCC TGACAAAGAG CGCTTGGAAG TTATTGCTTA TGATGCAATG
TTAATTAGGC CTGGTAGTAA AGTTACAAGC GCAGAAGTTA AGAAGGATTT AGATCGAATT
TATTCAACAG GCTGGTTCTC TGGTGCAAAA ATCGAGTCTT TGCAGAGTCC TCTAGGAGTT
AAACTTCTGA TTAAGATTGA ACCTAATCCA ATATTAAATA AGATAAGTAT ACTTCCGCTT
GAAAGAAAAC TATCAAATAC AAAATTAAAT GAGATTTTTA ATAATGATTA TGGTAAGACC
TTAAATCTCA ATACTCTACA AATAAGGATT AAGGAAATTA AGGATTGGTA TGCTAGTCAA
GGATACTCCT TGTCAAGGAT ATCTGGTCCA AGTCGTGTGA CCAAAGAAGG TAGAGTTGAA
CTTAATATTC AAGAAGGATA TATTGCTGGT ATCCAGATAA ATTTTATAGA TGAGGATGGA
AATGCAGAAG ATGAAAAAGG AAATTTAATA AAAGGAAAAA CTAAGAGATG GGTAATTAAA
AGAGAATTAA TAACTAAAGT TGGAGATATT TTTAATAGAA ACAAATTAGA ATCAGATATT
AAAAGATTAT ACTCAACGTC ACTTTTTAGT GATGTAAAAG TAACTCTTAA ACCAGTAATC
TCGGAACCTG GAAAGATTAT AGTTTCACTA GGTATAACAG AACAAAGAAC AGGCTCTTTG
ACGGGTGGGC TTGGTTATAG TGGAGGTCAA GGTGTGTTTG GACAGATCGG ATTACAAGAG
TCCAATCTGG TGGGAAGATC ATGGTCATCA AATATGAATT TGACTTATGG TGAATATGGA
GCACTGCTAA ATCTTTCCTT ATATGATCCA TGGATTAAAA ATGATAAACA TAGAACATCT
TTTAGAACTT CATTATATTT AAGTAGGGAG GTTCCTCAAG AATTTAGAAG TCAAGAGGGT
GGAAGTATTA GAGGAGTTAC AGATAGATAT GAAGCCCCGA ATTCGTTAAC AAGTTACGAC
ACTAATCAAT CTCAAAACTT AAACCTAAAT AATAATAATA CTTTAATAGA AACTGGGCCA
TTTACTAATC TTTATTCTGC TCAGTTATCT GCACCTCAGT TTAGCTGGTT TGATTATGAG
GGTGATTCTA TTGTCTTAGA GCGAACAGGA GGTGGCTTCT CTTTCGCAAG ACCTTTAAAT
GGTGGTCAGC CTCTAAAAAA GGTTCCTTGG AGTGTGCTTA TTGGTGCAAA CTTCCAGAAA
GTTAAGCCAA TAGACTATGC CGGAGATAAA AGACCTTATG GCGTAGCATC TACAAATTTT
ATAGATGGGA AAGTTCCTAA GAATGAAGTT ATTTGCGTTG CGTATAATTG CTCTACAGAG
AATACACTAG TTAGTTTTAA AAGTGCAGTT ACTTATAATA ATTTAGATAA TTCAAGAAAT
CCAACCTCTG GAGATTATTT AAATATTGGT TCTGAACAAT TTATTAGCTT AGGTGAGAAT
TCACCGACTT TTAATAGAAC TCGGGTTAGT TATTCTCGTT TTTATCCTGT TAATTGGCTG
AAGTTTCATA AGGGTTGTCG ACCAAAGCCT GGAGAAAAAT CAGATTGCTC TCAATCGATA
GGTTTTCAAG CAAAGATTGG AACAATCATC GGAGATTTAC CTCCTTATGA AGCATTTTGC
TTAGGAGGAG CCAGCTCTGT TCGGGGTTGG AACTCTTGTG ACTTAGGCGT CGCAAGAAAT
TTTGGAGAGG CAACAGGAGA ATATAGATTT CCTATTTGGC GATTAGTCTC TGGGGTCCTA
TTTGTTGACG CAGGATCTGA TTTTGGCTCT CAATCAAATG TTCCAGGGAA GCCTGGAAAA
ATTCTAGAAA AACCAGGCTC TGGTTTTTCT GTTGGACCAG GTGCAGTCAT TAATACACCT
GTTGGCCCAA TTCGAATAGA GGCGGCGACT CAAGATTTCA GTGGTAATTG GCGCTATAAC
ATCGGAATTG GCTGGAAATT CTAG
 
Protein sequence
MFKRHASSNR KLIGRAAYAI AFAFPFISLF GETKASKIVS SENQLFVQNK QSKRLQFSDQ 
LNPNKLNLNF DNFLISEGEN QKDENIVVEE KRVLISEIVI EGLEDHPDKE RLEVIAYDAM
LIRPGSKVTS AEVKKDLDRI YSTGWFSGAK IESLQSPLGV KLLIKIEPNP ILNKISILPL
ERKLSNTKLN EIFNNDYGKT LNLNTLQIRI KEIKDWYASQ GYSLSRISGP SRVTKEGRVE
LNIQEGYIAG IQINFIDEDG NAEDEKGNLI KGKTKRWVIK RELITKVGDI FNRNKLESDI
KRLYSTSLFS DVKVTLKPVI SEPGKIIVSL GITEQRTGSL TGGLGYSGGQ GVFGQIGLQE
SNLVGRSWSS NMNLTYGEYG ALLNLSLYDP WIKNDKHRTS FRTSLYLSRE VPQEFRSQEG
GSIRGVTDRY EAPNSLTSYD TNQSQNLNLN NNNTLIETGP FTNLYSAQLS APQFSWFDYE
GDSIVLERTG GGFSFARPLN GGQPLKKVPW SVLIGANFQK VKPIDYAGDK RPYGVASTNF
IDGKVPKNEV ICVAYNCSTE NTLVSFKSAV TYNNLDNSRN PTSGDYLNIG SEQFISLGEN
SPTFNRTRVS YSRFYPVNWL KFHKGCRPKP GEKSDCSQSI GFQAKIGTII GDLPPYEAFC
LGGASSVRGW NSCDLGVARN FGEATGEYRF PIWRLVSGVL FVDAGSDFGS QSNVPGKPGK
ILEKPGSGFS VGPGAVINTP VGPIRIEAAT QDFSGNWRYN IGIGWKF