| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0905 |
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| Symbol | lpxB |
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| ID | 3606290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 1407235 |
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| End bp | 1408407 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637687774 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_292099 |
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| Protein GI | 72382744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.288489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTAT TAATCAGCAC TGGTGAAGTC TCTGGAGACT TGCAGGGAAG TTTATTAATA
AATGCGTTAA AGACAAATGC CGAGAAAAGG AAAATTGAAT TAGAGATAAT TGCTTTAGGT
GGTGAAAGGA TGCAGGAAGC AGGCGCTAAA TTAATATCTA ATACTTCTTC GATAGGTGCG
ATTGGTTTTT TAGAAGCTCT CCCTTACGTT CTACCAACAT TAAATGCACA ATCAAAAATT
GACAATTACT TAAGTTCTTC CCCTCCTGAT GCAGTTGTTT TAATAGATTA TATGGGGCCA
AATATTCGAC TAGGATTAAA AGTAAAAAAA AAGTTCCCTA ATATTCCAAT AATCTATTAT
ATTGCGCCTC AGGAATGGGC ATGGAGATTA GGGGATTCGG GTACAACAGA TTTGATTAGT
TTTACAGATA AAATATTAGC TATCTTTGAA GAGGAAGCTA AATTTTATTC AAACAAGGGA
GGAAATGTAA AATTTGTAGG TCATCCAATG TTGGATTTCT ATCGAAATAT TCCTACTAGA
GAAGAAGCTT TGAGAAGAAT AGGATTAACT TCTGATCAGA AACTTCTTCT TATTATCCCG
GCTTCTCGCA AACAAGAACT TAAATATATT TTACCCACAT TACTAAAAGC AGCTAAGCTT
CTTCAGGAAA AAGATCCTTC TATTACTGTT CTAATACCAT CGGGATTAAA TGAATTTAAT
GAACTTTTAA ATGATTCATT AAAAGAATAT GCTCTTTCTG GAAGGATTAT TTTGTCTAAT
GAAGTTGACG ATTTAAAACC ATTTCTATTT TCAGCGGCTC ATCTTGCTTT AGCTAAGTCT
GGGACAATAA ATATGGAATT GGCTCTAAAC TCAGTTCCGC AAATCGTTGG ATATAAAGTA
AGTAGAGTTA CTGCTTTTTT CGCAAGATAT TTATTAAGAT TTAATGTTAA ATATATTTCT
CCAGTTAATC TTCTTTTAAA TAAAATGTTA ATACCAGAGT TTATACAAGA GGACTTTAAA
GCGGATAAAA TTTTTAATGC AGCATTAAAA ATCCTTGAAG ATAATTCAAC AAAAGAGGAC
ATAAAGCTTG GTTATGAAAG ATTGAAAGAT AAATTAGGAA AACCTGGAGT TACAGATAGA
GCATCAAAGG ATATTCTAGA CTTATTAATT TAA
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| Protein sequence | MKLLISTGEV SGDLQGSLLI NALKTNAEKR KIELEIIALG GERMQEAGAK LISNTSSIGA
IGFLEALPYV LPTLNAQSKI DNYLSSSPPD AVVLIDYMGP NIRLGLKVKK KFPNIPIIYY
IAPQEWAWRL GDSGTTDLIS FTDKILAIFE EEAKFYSNKG GNVKFVGHPM LDFYRNIPTR
EEALRRIGLT SDQKLLLIIP ASRKQELKYI LPTLLKAAKL LQEKDPSITV LIPSGLNEFN
ELLNDSLKEY ALSGRIILSN EVDDLKPFLF SAAHLALAKS GTINMELALN SVPQIVGYKV
SRVTAFFARY LLRFNVKYIS PVNLLLNKML IPEFIQEDFK ADKIFNAALK ILEDNSTKED
IKLGYERLKD KLGKPGVTDR ASKDILDLLI
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