Gene PMN2A_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0900 
Symbol 
ID3606285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1402524 
End bp1403771 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content33% 
IMG OID637687769 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_292094 
Protein GI72382739 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATC ACATCAATGA ATTACCTGAT TGGATCTCTA GAGGGTTAGA TGATCTTTTC 
CCTAATGATA ATTCAGGAGA TTCAGATCAA AGCTTTCTAA AAAGATTAGA ACTTTCATCT
GTAGATAAAA AGCCTTTACG TGTAAAACTT GGAATTGATC CAACAGGAAC TGATATTCAT
ATAGGTCATA GCATTCTTTT TAGAAAATTA AGAGCTTTCC AAGATGCTGG ACATACGGCA
ATACTTATAA TCGGAGATTT CACAGCAAGG ATTGGAGACC CAACTGGAAA GAGTAAAACT
AGAATTCAGC TTTCAAAAGA TGAGGTTCAA TCAAATGCAT TGAATTACCT TGAGCAATTA
GGACTTGGTA AAGATCCCAA AGATTCATTA CTTGATTTTT CAATTCCCAG TCGCATAGAA
ATCAGAAGAA ATAGTGAGTG GCTTGAAAAT CTTAATTTGT CTAAAGTTAT AGAACTTTTA
TCAAATTCAA CAGTTGGTCA AATGCTGGCT AAGGAAGACT TTAGTAATCG ATATAAATCT
GGCACTCCTA TATCTCTTCA TGAATTTCTC TATCCGCTTC TTCAAGGATA TGATTCTGTT
GCGATCAATT CTGATGTGGA ACTTGGTGGT ACAGATCAAA AATTTAATAT TGCTATGGGG
CGAGATCTGC AAAAAGCTTT TGGACAGAAA CCCCAATTTG GAATGCTATT ACCTATTTTA
GTTGGATTAG ATGGGGCACG AAAAATGAGT AAAAGCTTAG ACAATATTGT AGGAATAAAT
GAAGATTCAT TATCTATGTA TTCAAAATTA GAAAAGGTTC CAGATGATTT GGTTCTTACA
TATTTAAATT TACTCACTAA TGAAAACTTA AAAGAATTAA GTTCAAATCC AAGAGAGGTT
CAGAAATTTA TGGCTTTAAA AGTAACATCT AATTTTAAAG GAATTGAGGC AGCAAAAAAT
GCTCAATTTA ATTCTGAAAA ATTAGTTTTA GGTACTAAAG ATTCTCTTGA GGAAATACCA
GAAGCATCAG TTTCTAATGT GAATTTTCCA GCTAAAGCAT TTTATTTATT TAGTAAGATG
GAAATGTGTT CAAGTAGCAG TGAAGCAAGA AGACAAATTC TTGGAGGAGG AGTGAGAATT
GATGGGAAAA AAATTATGGA TCCTAATTTA GAGTTTCACA CTCCAGATGA TCTCATAGGA
AAAATATTAC AAGTAGGAAA GAAGAAATTT CTTCGTGTTT CAACTTGA
 
Protein sequence
MLDHINELPD WISRGLDDLF PNDNSGDSDQ SFLKRLELSS VDKKPLRVKL GIDPTGTDIH 
IGHSILFRKL RAFQDAGHTA ILIIGDFTAR IGDPTGKSKT RIQLSKDEVQ SNALNYLEQL
GLGKDPKDSL LDFSIPSRIE IRRNSEWLEN LNLSKVIELL SNSTVGQMLA KEDFSNRYKS
GTPISLHEFL YPLLQGYDSV AINSDVELGG TDQKFNIAMG RDLQKAFGQK PQFGMLLPIL
VGLDGARKMS KSLDNIVGIN EDSLSMYSKL EKVPDDLVLT YLNLLTNENL KELSSNPREV
QKFMALKVTS NFKGIEAAKN AQFNSEKLVL GTKDSLEEIP EASVSNVNFP AKAFYLFSKM
EMCSSSSEAR RQILGGGVRI DGKKIMDPNL EFHTPDDLIG KILQVGKKKF LRVST