Gene PMN2A_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0895 
Symbol 
ID3606280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1398939 
End bp1399688 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content39% 
IMG OID637687764 
Productputative transporter, membrane component 
Protein accessionYP_292089 
Protein GI72382734 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.378431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACT CACCTCGTTG GCTAAGAAGG TTTTTTAGCA GTATTTTAAT TGGAGGGCAA 
GCAATTGCAT CAATAGCTAA AGGGAATATA AATAAATCAG ATTTAATAGA TCAATTAATG
GAGGCAGGGC CAGGAAGCTT CCTTATCGTC TTAATAACAG GCATTGCAGC AGGAACCGTT
TTCAATATTC AAGTCGCAGC AGAATTAAGT AAACAAGGAT TAGGTTCTGC TGTTGGAGGA
CTTTTAGCAA TTGGTATGGC AAGAGAGATA GCTCCTTTAC TTACCGCAAC TCTTCTTACT
GGAAAAGTTG CAACTGCTTA TGCTGCTCAA ATAGGAACAA TGAAAGTTAC TGAACAAATA
GATGCTATTA CGATGTTACA AACAGATCCC GTTGAATATC TAGTTGTTCC AAGGATATGC
GCAATGGTTG TAATGGCGCC AATTCAATGC TTACTATTTT TTTCTATCGC TTTATTTAGC
GGTCAATTTA GCAGCACCAT TCTCTATCAG ATTCCACCAA GCATCTTTTG GAATTCAGTT
AGAGAATGGC TGATAACATC TGATCTTCCT TTTATGCTTG TTAAAGCATT GGTGTTTGGT
CTCTTAATCG CAATTATTGC TTGCGGATGG GGATTAACCA CAAGAGGCGG GCCAAAAGAA
GTAGGTTCAA GCACTACTGG AGCTGTAGTT ATGACTCTAA TAACCGTTTC TTTAGTAGAT
GTTTTACTCA CCCAAGTTCT TTTTGCCTAA
 
Protein sequence
MNYSPRWLRR FFSSILIGGQ AIASIAKGNI NKSDLIDQLM EAGPGSFLIV LITGIAAGTV 
FNIQVAAELS KQGLGSAVGG LLAIGMAREI APLLTATLLT GKVATAYAAQ IGTMKVTEQI
DAITMLQTDP VEYLVVPRIC AMVVMAPIQC LLFFSIALFS GQFSSTILYQ IPPSIFWNSV
REWLITSDLP FMLVKALVFG LLIAIIACGW GLTTRGGPKE VGSSTTGAVV MTLITVSLVD
VLLTQVLFA