Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0895 |
Symbol | |
ID | 3606280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1398939 |
End bp | 1399688 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637687764 |
Product | putative transporter, membrane component |
Protein accession | YP_292089 |
Protein GI | 72382734 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.378431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTACT CACCTCGTTG GCTAAGAAGG TTTTTTAGCA GTATTTTAAT TGGAGGGCAA GCAATTGCAT CAATAGCTAA AGGGAATATA AATAAATCAG ATTTAATAGA TCAATTAATG GAGGCAGGGC CAGGAAGCTT CCTTATCGTC TTAATAACAG GCATTGCAGC AGGAACCGTT TTCAATATTC AAGTCGCAGC AGAATTAAGT AAACAAGGAT TAGGTTCTGC TGTTGGAGGA CTTTTAGCAA TTGGTATGGC AAGAGAGATA GCTCCTTTAC TTACCGCAAC TCTTCTTACT GGAAAAGTTG CAACTGCTTA TGCTGCTCAA ATAGGAACAA TGAAAGTTAC TGAACAAATA GATGCTATTA CGATGTTACA AACAGATCCC GTTGAATATC TAGTTGTTCC AAGGATATGC GCAATGGTTG TAATGGCGCC AATTCAATGC TTACTATTTT TTTCTATCGC TTTATTTAGC GGTCAATTTA GCAGCACCAT TCTCTATCAG ATTCCACCAA GCATCTTTTG GAATTCAGTT AGAGAATGGC TGATAACATC TGATCTTCCT TTTATGCTTG TTAAAGCATT GGTGTTTGGT CTCTTAATCG CAATTATTGC TTGCGGATGG GGATTAACCA CAAGAGGCGG GCCAAAAGAA GTAGGTTCAA GCACTACTGG AGCTGTAGTT ATGACTCTAA TAACCGTTTC TTTAGTAGAT GTTTTACTCA CCCAAGTTCT TTTTGCCTAA
|
Protein sequence | MNYSPRWLRR FFSSILIGGQ AIASIAKGNI NKSDLIDQLM EAGPGSFLIV LITGIAAGTV FNIQVAAELS KQGLGSAVGG LLAIGMAREI APLLTATLLT GKVATAYAAQ IGTMKVTEQI DAITMLQTDP VEYLVVPRIC AMVVMAPIQC LLFFSIALFS GQFSSTILYQ IPPSIFWNSV REWLITSDLP FMLVKALVFG LLIAIIACGW GLTTRGGPKE VGSSTTGAVV MTLITVSLVD VLLTQVLFA
|
| |