| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0893 |
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| Symbol | |
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| ID | 3606277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 1395307 |
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| End bp | 1397367 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637687761 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_292087 |
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| Protein GI | 72382732 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0763625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGAAAAG TAAAAGTTGG TTCAGCATGG CCTTTGGGTA GCTCCGTTAC TCTTGATGGG
GTTAATTTCT CTATCGCAGC ACCACATGCA ACAAATTTAG AATTATTAAT CTTCCAGAAT
GAAGATGACG AGTATGCAAA AGAAACAATA TCCTTAGATC AGAAAAATAG GTCTGGAGAT
TATTGGCACG TTGAAATAGA GGGTCTAGCT GAAGGAACTT TATATGGATA TAAAGTATCA
ATTGATGGGC AAAAAGCTGC CGAGGACCAT CTTGTTTTAG ATCCATGTGC CAGAGCAATT
ACAGGGTGGA AGAATTACAT AAGGAATCAT AAAGAAAAAG TGAATAGAGG TTATGCTCAT
TGCCTCAAGG GAGTAGTAAC TAAAAGAGAT TATTTTGATT TCAAATCTCA CCCTAGGCCT
AAACATTCAT GGAATAAAAC TATTATTTAT GAATTACATG TTGGTGGATT TACGAAAAGT
AATGATTCAA GTGTTAGTGA AAGAAAGAAA GGTACATTTT TAGGATTAAT TGAAAAGATA
CCTTATCTTA AAAGTCTTGG CATTACAACT ATTGAATTAC TTCCGGTATT CGCTTTTGAT
TCTAACGATG CCCCTGAAGG ACTTGTTAAC TATTGGGGAT ATAGTCCTAT TAATTGGTTC
ACGCCACATC AAGATTTTGT AGATAGTTGT AATCCATTAG AAGCTAGGAG ACAATTCAAA
AAATTAGTAG AAGTTTGCCA TGATAATGAG CTAGAAGTAT TAATAGATGT TGTTTATAAT
CACACAACAG AAGGGAATCA AAATGGTCCA AATATAAGTT GGAAAAATTT TGGTCCTAAA
ACTTACTATC ATCAAGACGA TAAAGAAAAT TACCAAGATG TGAGTGGATG TGGAAATAGT
ATTGCCGCTA ATCGTCCTTT AGTTAGAAAA TTAATATTGG AATCATTGCG TTGTTGGGCA
ATTGAGTTAG GTGTTGATGG ATTTCGTTTT GACTTAGGTA TTGCTTTGAG TAGAGGCGAA
AATTTAATTC CTTTAGATAA ACCTCCCTTA TTTGAAGAAA TAGAAGCAGA TCCTAAACTT
AGCGATGTGA AATTAATCAG TGAGCCTTGG GATTGTGGTG GACTTTACAA ACTAGGTGAT
TTTCCAGCGA AACAATTCAG AACTTGGAAT GGTCATTTTA GAGATGATAT TAGACGATTT
TGGAAAGGAG ATAAAGGCAC AATCTGGCCA CTTAAAGATA GATTAATAGG TAGTAAGTCC
CTATATAAAG ATAATAATTT AGCAAATATA TTTAGTATTA ATTTCATAAC TTCTCATGAT
GGATTCACAT TAAAAGATCT AGTAAGTTTT AACAAAAAGC ATAACCTTGC AAATGGGGAA
AATAATAGAG ATGGGGAGAA CAATAATAAT AGTTATAATT ATGGAGTTGA AGGACCAACT
ACTGATAAAG AAATAAATAA TTTAAGGCAA AAACAACAAA GAAATCTTCT TGCAACACTT
CTTTTATCTC CTGGAGTACC AATGATTTTA ATGGGAGACG AATTAGGTAG AAGCCAAGGG
GGGAATAACA ACACATGGTG TCAAGACAAC CCACTTGGTT GGATGGATTG GAATCACAAC
AATTGGGATC ATGACTTAAA AGAATTTGTA TTAAAGCTGA TATCTCTAAG GAAACAACTA
TCTGAATTTT TCAGTCCTGA TAGTATTTAT GATTGTCAAA AAGATAATAC CAAGGTCAAA
ACATCTTATT TTTGGATTCA GTGGCATGGC ATTAAAGTTA ATAAACCTGA CTGGGGTGAC
TGGTCACATA CTCTTGGATT TAGCATTAAC AAAAACAATG ATGGCTCAGC AATTTGGCTT
GGCTTCAATG CTTACAAAGA ATCAATGCTT TTTGACTTAC CAACCCCAAT TTCTCCTTGG
AAAAAATATA TTGATACGTC TATCTTGAAA ACTAAAAATG TCTCCAAAAA AACCCTAGCG
AATCAATCAA ATGTTCGGAT TGAAAGTAAC AGTCTTGTTC TTATGGTCTC CAGCGAGTAT
TCAAAAAAAA TTAAGCTATG A
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| Protein sequence | MGKVKVGSAW PLGSSVTLDG VNFSIAAPHA TNLELLIFQN EDDEYAKETI SLDQKNRSGD
YWHVEIEGLA EGTLYGYKVS IDGQKAAEDH LVLDPCARAI TGWKNYIRNH KEKVNRGYAH
CLKGVVTKRD YFDFKSHPRP KHSWNKTIIY ELHVGGFTKS NDSSVSERKK GTFLGLIEKI
PYLKSLGITT IELLPVFAFD SNDAPEGLVN YWGYSPINWF TPHQDFVDSC NPLEARRQFK
KLVEVCHDNE LEVLIDVVYN HTTEGNQNGP NISWKNFGPK TYYHQDDKEN YQDVSGCGNS
IAANRPLVRK LILESLRCWA IELGVDGFRF DLGIALSRGE NLIPLDKPPL FEEIEADPKL
SDVKLISEPW DCGGLYKLGD FPAKQFRTWN GHFRDDIRRF WKGDKGTIWP LKDRLIGSKS
LYKDNNLANI FSINFITSHD GFTLKDLVSF NKKHNLANGE NNRDGENNNN SYNYGVEGPT
TDKEINNLRQ KQQRNLLATL LLSPGVPMIL MGDELGRSQG GNNNTWCQDN PLGWMDWNHN
NWDHDLKEFV LKLISLRKQL SEFFSPDSIY DCQKDNTKVK TSYFWIQWHG IKVNKPDWGD
WSHTLGFSIN KNNDGSAIWL GFNAYKESML FDLPTPISPW KKYIDTSILK TKNVSKKTLA
NQSNVRIESN SLVLMVSSEY SKKIKL
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