Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0815 |
Symbol | |
ID | 3606195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1318228 |
End bp | 1318935 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637687680 |
Product | TPR repeat-containing protein |
Protein accession | YP_292009 |
Protein GI | 72382654 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0605859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGTT TTGGAGAACA GAAAAAGTCA AAAAAGAAAA GCAATAAAAA GACCACACAT TCTAAAGAAG AAATAATAAA TCAAGCATTT AAGTTTCATT CACAAGGAAA TATTCGAGAA GCTACAAAAT ATTATCAAAA TTTTATAAGT CAAGGTTTCA AGGATCACAG AGTTTTTACT AATTACGGAG GCATATTAAG AAATCTTGGA AAATTAAAAG AAGCAGAATT ATTAACCCGT AAAGCAACTG AGCTAAAACC TGATTTCGCA ATGGCGCACT CCAACATGGG AACCATCTTG ATAGATCTTG GTAAATTAAA AGAAGCAGAA CTATCTACAC GCAAAGCGAT TGAACTCAAT CCTTATATTG CAAATGATCA TTTAAATCTT GGAAACATAT TAATTGAACT TGGTAAATTA AAAGAAGCAG AATTATCTAC TCGCAAAGCG ATTGAACTTA ATCCTGACTT AGCTGATGCT CATTACAATC TAGGTATCAT CCTGAAATAT CTAAACAAGT TAGATGAGTC TATATACTGT TACCAGAAAG CTATAGATTT AAAAAAAGAT TTAAAAAAAG CGATAGCAGA AATGGGAGTT ACGATGACCT TAATTGGAAA TTACAAAGAA GGACTTCAAA AAATAAAAGA AGGCTATGGT TCAATTATCT TTAACCACAC AACTAATTCT ATGAAAATTG AAATTTAA
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Protein sequence | MSGFGEQKKS KKKSNKKTTH SKEEIINQAF KFHSQGNIRE ATKYYQNFIS QGFKDHRVFT NYGGILRNLG KLKEAELLTR KATELKPDFA MAHSNMGTIL IDLGKLKEAE LSTRKAIELN PYIANDHLNL GNILIELGKL KEAELSTRKA IELNPDLADA HYNLGIILKY LNKLDESIYC YQKAIDLKKD LKKAIAEMGV TMTLIGNYKE GLQKIKEGYG SIIFNHTTNS MKIEI
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