Gene PMN2A_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0815 
Symbol 
ID3606195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1318228 
End bp1318935 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content31% 
IMG OID637687680 
ProductTPR repeat-containing protein 
Protein accessionYP_292009 
Protein GI72382654 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0605859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTT TTGGAGAACA GAAAAAGTCA AAAAAGAAAA GCAATAAAAA GACCACACAT 
TCTAAAGAAG AAATAATAAA TCAAGCATTT AAGTTTCATT CACAAGGAAA TATTCGAGAA
GCTACAAAAT ATTATCAAAA TTTTATAAGT CAAGGTTTCA AGGATCACAG AGTTTTTACT
AATTACGGAG GCATATTAAG AAATCTTGGA AAATTAAAAG AAGCAGAATT ATTAACCCGT
AAAGCAACTG AGCTAAAACC TGATTTCGCA ATGGCGCACT CCAACATGGG AACCATCTTG
ATAGATCTTG GTAAATTAAA AGAAGCAGAA CTATCTACAC GCAAAGCGAT TGAACTCAAT
CCTTATATTG CAAATGATCA TTTAAATCTT GGAAACATAT TAATTGAACT TGGTAAATTA
AAAGAAGCAG AATTATCTAC TCGCAAAGCG ATTGAACTTA ATCCTGACTT AGCTGATGCT
CATTACAATC TAGGTATCAT CCTGAAATAT CTAAACAAGT TAGATGAGTC TATATACTGT
TACCAGAAAG CTATAGATTT AAAAAAAGAT TTAAAAAAAG CGATAGCAGA AATGGGAGTT
ACGATGACCT TAATTGGAAA TTACAAAGAA GGACTTCAAA AAATAAAAGA AGGCTATGGT
TCAATTATCT TTAACCACAC AACTAATTCT ATGAAAATTG AAATTTAA
 
Protein sequence
MSGFGEQKKS KKKSNKKTTH SKEEIINQAF KFHSQGNIRE ATKYYQNFIS QGFKDHRVFT 
NYGGILRNLG KLKEAELLTR KATELKPDFA MAHSNMGTIL IDLGKLKEAE LSTRKAIELN
PYIANDHLNL GNILIELGKL KEAELSTRKA IELNPDLADA HYNLGIILKY LNKLDESIYC
YQKAIDLKKD LKKAIAEMGV TMTLIGNYKE GLQKIKEGYG SIIFNHTTNS MKIEI