Gene PMN2A_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0728 
Symbol 
ID3606106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1220372 
End bp1221487 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content30% 
IMG OID637687591 
Productputative DNA photolyase 
Protein accessionYP_291922 
Protein GI72382567 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.947552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TTGATGAGGC TAATGATTTA TTAGATAATT TCATTTTCGA TCACCTTAAT 
TCATACCATC AACTAAGAAA TTACGATTAT GGGATCGAAA ACAGGACTAA TGTTTCTCAG
ATTTCTAAAT ATACATCTCA TAGAATCCTT TACGAATTTG ACATAATTGA AAAATTGAAA
AAGTATGATA AGAAACAAAA GTACACTGAT GAAATCCTTT GGAGGATCTA CTGGAAGGGT
TATCTTGAAA ATTACAAATC CATATGGTTT GAATATATAA ATTTCAAAGA AAACTCAAAT
AATTCATACT TAATTAGTTC TGCGATGAAT GGTAAGACAG GTATAGATTG CTTTGATACA
TGGATAGAGG AGCTTAAAGA AAATAACTAT TTGCATAATC ACGCAAGGAT GTGGTTCGCA
AGTATATGGA TTTTCACTCT GGGACTTCCA TGGCAATTAG GAGCGAGGCT TTTCATGAAA
CATCTACTAG ATGGAGATGC TGCATCAAAC ACCCTTAGCT GGAGATGGGT GGCTGGTATG
CACACGAATA AGAAGCCTTA CTTAGCATCT AAAGAAAACA TCAATAAGTA CACAGTTAAT
CGATTTAGAG ATACTCCAAT CAGCATCTCG AGCAAAATTA ATATCATAAA ACATAGTCAA
CATCAATCGA ACAAACTTCC AGTTCAAAGA AGTTTCCCTA ATAGTAATAT TCTAATAATG
TTTGATAATG ATATGGATAT CATGAACAGA TCAACGTTAT TTAATTCATA CTCAAAAGTT
TATATATTGC GTAATATACC CATAAATAAT GAATTTGAGC TAAGTGAAAA CGTGAGTCAA
TTCAAACGAG GTCTAATTGA TAAAATAAAT AAGTTAATCC CAAACTCAAA AGTATTAAAA
TTAACTGACC TAGGAATTAA TTTGTCTGGT CACAGTATAA TTGATGTTAT CTACCCAGGA
ATTGGGCATA ACCTAGATTC AATAAATAAA TTTGCCAATC AAAATCAAAT CATTATTAAT
TATATATATA GAGAAGAAGA TCTTAAATGT TGGAATTATA CAAATTCAGG ATTTTACAAA
TTTAAAACTT TATTTTATAG ACTGAATATG ATCTAA
 
Protein sequence
MNIFDEANDL LDNFIFDHLN SYHQLRNYDY GIENRTNVSQ ISKYTSHRIL YEFDIIEKLK 
KYDKKQKYTD EILWRIYWKG YLENYKSIWF EYINFKENSN NSYLISSAMN GKTGIDCFDT
WIEELKENNY LHNHARMWFA SIWIFTLGLP WQLGARLFMK HLLDGDAASN TLSWRWVAGM
HTNKKPYLAS KENINKYTVN RFRDTPISIS SKINIIKHSQ HQSNKLPVQR SFPNSNILIM
FDNDMDIMNR STLFNSYSKV YILRNIPINN EFELSENVSQ FKRGLIDKIN KLIPNSKVLK
LTDLGINLSG HSIIDVIYPG IGHNLDSINK FANQNQIIIN YIYREEDLKC WNYTNSGFYK
FKTLFYRLNM I