Gene PMN2A_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0478 
Symbol 
ID3605852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1002231 
End bp1003148 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content37% 
IMG OID637687337 
Productpermease 
Protein accessionYP_291672 
Protein GI72382317 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.357892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATAA TCCTTCTTTT ATCTGAATTA ATACCATGTC TTTTAATAGG CTATTTACTC 
GGGCGATTTA AAGAAAATTT ATCTCTAACG ATTTCTCGTC CACTAATTAG CTATGGAATT
CCTATCAGCT TGATGGGGAT ATTACTTAAG TCTGGACTAG AATTGCCCTT AATAGAATCT
GCTGCATTAG CATTGGTAGC TATTGGCTTT TTAATGACTA TATTAAATCG CCTTCCTAGT
GTAAATAACC TTATACAAAA CAGAACGCTT CAATTAGGGA GCGCATTTGG AAATACAGGG
TATTTTGGAA TACCAGTTTC ACTAGCACTG CTTCCCGATC ATGCTTTGAT CTACAGCATT
GGATTTGACC TCGGTGCGAC ATTAGTGATT TGGAGTCTCG GACCAATACT GTTAACAGAT
CCTTCAAAAG TTTTAAGTTC TAATAGATAT TGGAAGAATT TCATAAAAGG AATATTTAGC
AGTCCTGCTG TTAAAGGATT AATTGGCGCG TTAATTATTC ATTCATCTCC ATGGGATGAA
CAAATAACAT ACTTACTATG GATTCCATCA AGAGTTGTAA TTGTTCTAGC ACTGGTAATC
GTTGGAATGC GTCTAAGTTG GCTAAGGAAA GCCAATCTTT CAAGAATAAA AAACCAAATA
ACATCCATAA AAAATGCATT AATCATGAAA CTGGTTGGAT TGCCAGTCAT TATGTTGATC
ATTTCCTCAG TAATAAGATT ACCCAGCGTC ATGCGAGAGG CCTTAGTACT GCAAGCAGCT
GCGCCAACAG CAATATCTAT CTTATTAATC TCCCAAGCAG CCTCAAGAGA TGAAAAGGAA
GCAACCTCTC TTGTTGTTTT TAGTACGATC ACCGCACTCA TATCAATCCC AGCTTGGTTG
TTGATTTTAA GATTGTAA
 
Protein sequence
MEIILLLSEL IPCLLIGYLL GRFKENLSLT ISRPLISYGI PISLMGILLK SGLELPLIES 
AALALVAIGF LMTILNRLPS VNNLIQNRTL QLGSAFGNTG YFGIPVSLAL LPDHALIYSI
GFDLGATLVI WSLGPILLTD PSKVLSSNRY WKNFIKGIFS SPAVKGLIGA LIIHSSPWDE
QITYLLWIPS RVVIVLALVI VGMRLSWLRK ANLSRIKNQI TSIKNALIMK LVGLPVIMLI
ISSVIRLPSV MREALVLQAA APTAISILLI SQAASRDEKE ATSLVVFSTI TALISIPAWL
LILRL