Gene PMN2A_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0341 
Symbol 
ID3605714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp886298 
End bp887572 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content27% 
IMG OID637687200 
Productexoribonuclease R/ribonuclease II 
Protein accessionYP_291536 
Protein GI72382181 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0618885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACAA AAATAATAGA AGATGAAATA AAAGATATAA TATTCAGATC TAACACAAGT 
AATAATTTAA ATTCTGCAGT TAAAGATCTT ACCCATCTTA AAACATATAC AATAGATGAT
TCTAAAACGG TAGAAATAGA TGATGCAATT TCACTAGAAC AAGTATCTGG TCAGAACAAG
TTATGGATTC ATATTGCATC CCCTGCCTCC TATATTGAAT ATCAATCAGG TATAGATGAA
AAAGCAAGAA AACTTGTCTC AACTGTTTAT TTGTCTAACA ATACCTATTA CATGCTTCCC
AAAGCCTTAA TAAATAATGT ATTCAGCCTA AGTGATAAAG AAAAGAGAGA ATCATTAAGC
TTAGGTGTTA TCTTAAATGA TGACGGTAGT ATTTCTTCTA CTGAAATTGT TCAGAGTTTG
ATACAAGTAG ATTATCGCTT AGATTTTATA GAAGCTGATG AACTTATAGA TTATGCGCCA
AAAGAAGAGA TAGATTTAAG TCTTATATCA ACAATTTTAG AAAGTAGAAA GAGCTGGAGA
AAGAATTTAG GTTCAATTGA AATATTAGAA TCTTATGGAA AAATAGTTGT TGAAGATAAG
ATTCCCAACA TAAAAATAAT TGATCCAACT TTATCAAGAC AACTTATAAG TGAGGCTATG
ATCTTGTACG GAGATATTAT TTCAAATTTT ACTAAGCTAA ATAAAATACC TGTTCCATAT
AGGGTTCAAG AACGCTCAGA TAAAGTAAGT AATGATAATA TTCAACTTTC TGATAATAAA
ATTTTATATA ATTTTTTACT TAAGAAAACT ATGGGTAAAA CTTATTATTC TATAAATCCA
ATGCAACATG ATAGTTTAGC ATTAACTTCT TATTTACATG CTACATCTCC CATTAGAAGA
TATGCTGACT TGTTAGTTCA CTATCAATTA AATAGATTTC TTAATAATAA AGTTCTCATA
TCTAAGGATG ATGTTCAACA GATTATTCAT GAGATTAATA TTCAAGGAAG ACAAAATATC
ATGAGATTTA GAGAAGATCA AAAATATTGG TTAGGTAAAT GGTTCGAAAA TAACACTTTT
AATGAATATA GTGTGATATT GCTTAATTGG ATAAATAGGT ATAAAAATAC TTGCCTTCTA
TACTTTGTCG ATTATAATTT TTCTACAATA TCCAATTTGC ATTCAAAATT AAATATAAAT
ATCGGGGACA ATTTTAACGT AAAAAATACT AACCATGATA ATAACGATAT GAATAATTTT
GAGATAATTC AATGA
 
Protein sequence
MGTKIIEDEI KDIIFRSNTS NNLNSAVKDL THLKTYTIDD SKTVEIDDAI SLEQVSGQNK 
LWIHIASPAS YIEYQSGIDE KARKLVSTVY LSNNTYYMLP KALINNVFSL SDKEKRESLS
LGVILNDDGS ISSTEIVQSL IQVDYRLDFI EADELIDYAP KEEIDLSLIS TILESRKSWR
KNLGSIEILE SYGKIVVEDK IPNIKIIDPT LSRQLISEAM ILYGDIISNF TKLNKIPVPY
RVQERSDKVS NDNIQLSDNK ILYNFLLKKT MGKTYYSINP MQHDSLALTS YLHATSPIRR
YADLLVHYQL NRFLNNKVLI SKDDVQQIIH EINIQGRQNI MRFREDQKYW LGKWFENNTF
NEYSVILLNW INRYKNTCLL YFVDYNFSTI SNLHSKLNIN IGDNFNVKNT NHDNNDMNNF
EIIQ