Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0341 |
Symbol | |
ID | 3605714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 886298 |
End bp | 887572 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637687200 |
Product | exoribonuclease R/ribonuclease II |
Protein accession | YP_291536 |
Protein GI | 72382181 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0618885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCACAA AAATAATAGA AGATGAAATA AAAGATATAA TATTCAGATC TAACACAAGT AATAATTTAA ATTCTGCAGT TAAAGATCTT ACCCATCTTA AAACATATAC AATAGATGAT TCTAAAACGG TAGAAATAGA TGATGCAATT TCACTAGAAC AAGTATCTGG TCAGAACAAG TTATGGATTC ATATTGCATC CCCTGCCTCC TATATTGAAT ATCAATCAGG TATAGATGAA AAAGCAAGAA AACTTGTCTC AACTGTTTAT TTGTCTAACA ATACCTATTA CATGCTTCCC AAAGCCTTAA TAAATAATGT ATTCAGCCTA AGTGATAAAG AAAAGAGAGA ATCATTAAGC TTAGGTGTTA TCTTAAATGA TGACGGTAGT ATTTCTTCTA CTGAAATTGT TCAGAGTTTG ATACAAGTAG ATTATCGCTT AGATTTTATA GAAGCTGATG AACTTATAGA TTATGCGCCA AAAGAAGAGA TAGATTTAAG TCTTATATCA ACAATTTTAG AAAGTAGAAA GAGCTGGAGA AAGAATTTAG GTTCAATTGA AATATTAGAA TCTTATGGAA AAATAGTTGT TGAAGATAAG ATTCCCAACA TAAAAATAAT TGATCCAACT TTATCAAGAC AACTTATAAG TGAGGCTATG ATCTTGTACG GAGATATTAT TTCAAATTTT ACTAAGCTAA ATAAAATACC TGTTCCATAT AGGGTTCAAG AACGCTCAGA TAAAGTAAGT AATGATAATA TTCAACTTTC TGATAATAAA ATTTTATATA ATTTTTTACT TAAGAAAACT ATGGGTAAAA CTTATTATTC TATAAATCCA ATGCAACATG ATAGTTTAGC ATTAACTTCT TATTTACATG CTACATCTCC CATTAGAAGA TATGCTGACT TGTTAGTTCA CTATCAATTA AATAGATTTC TTAATAATAA AGTTCTCATA TCTAAGGATG ATGTTCAACA GATTATTCAT GAGATTAATA TTCAAGGAAG ACAAAATATC ATGAGATTTA GAGAAGATCA AAAATATTGG TTAGGTAAAT GGTTCGAAAA TAACACTTTT AATGAATATA GTGTGATATT GCTTAATTGG ATAAATAGGT ATAAAAATAC TTGCCTTCTA TACTTTGTCG ATTATAATTT TTCTACAATA TCCAATTTGC ATTCAAAATT AAATATAAAT ATCGGGGACA ATTTTAACGT AAAAAATACT AACCATGATA ATAACGATAT GAATAATTTT GAGATAATTC AATGA
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Protein sequence | MGTKIIEDEI KDIIFRSNTS NNLNSAVKDL THLKTYTIDD SKTVEIDDAI SLEQVSGQNK LWIHIASPAS YIEYQSGIDE KARKLVSTVY LSNNTYYMLP KALINNVFSL SDKEKRESLS LGVILNDDGS ISSTEIVQSL IQVDYRLDFI EADELIDYAP KEEIDLSLIS TILESRKSWR KNLGSIEILE SYGKIVVEDK IPNIKIIDPT LSRQLISEAM ILYGDIISNF TKLNKIPVPY RVQERSDKVS NDNIQLSDNK ILYNFLLKKT MGKTYYSINP MQHDSLALTS YLHATSPIRR YADLLVHYQL NRFLNNKVLI SKDDVQQIIH EINIQGRQNI MRFREDQKYW LGKWFENNTF NEYSVILLNW INRYKNTCLL YFVDYNFSTI SNLHSKLNIN IGDNFNVKNT NHDNNDMNNF EIIQ
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