Gene PMN2A_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0332 
Symbol 
ID3605705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp874954 
End bp875868 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content34% 
IMG OID637687191 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_291527 
Protein GI72382172 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0235876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAATT TTCTTCCCTT CGCTTGGTTT GAGGGTCAAT GTATTCCATT CAATGATGCA 
AAGCTATCAA TAGCTACTCA CGCTCTTCAT TATGGAACTG CAGCTTTTGG TGGGATGCGT 
GCTATCCCTG ACCCAAATAA TAGTAAATCA TTTTTATTAT TTAGGGCAGA TAAACATGCA 
AAAAGATTAT GCCAAAGCGC TAAATTTTTG ATGACTGAAT TAGATGAGGA TTTTGTATTA 
AACTCTCTAG AAACGTTTCT AGTCAAAAAT AAACCTACTC AACCTGTTTA TATAAGACCA 
TTTGTATATA CTAGTGATTT AGGAATTGCA CCAAGATTAC ATAATATCGA AACTAATTTC 
TTTATTTATG GAATAGAATT AGGGGATTAT CTTTCACCAG ATGGTGTTAC ATGTCGTGTC 
AGTAGCTGGA CCCGTCAGCA AGACAATTCA CTTCCTCTGC GTGGAAAAAT TAGTGGAGCA 
TACATAACAA GCTCATTAGC TAAAACAGAA GCAGTAAAAA GTGGATTTGA TGAGGCACTT 
TTACTTAATA GTCAAGGTAA AGTTAGTGAG GCTAGTGGAA TGAACATCTT TATAGTTCGG 
AATGGTGATC TTATAACACC TGGTGTAGAT CAAGATATTC TTGAAGGTAT TACTCGTGCA 
AGTGTTATAG AACTTGCTAA GAGTAATGGA ATAAATGTTA TTGAAAGACC TGTAGATAAA 
ACAGAGTTAT TTATATCGGA TGAGGTATTC TTAACAGGCA CAGCTGCAAA GATAACTCCG 
ATTAAAATGA TTGAAACAAC ATTAATGAGT AAAGAAATGC CAACAATGAA TTTACTCAGA 
GATAAATTAA CTAAAATTAC AGAAGGTTTA GTACCCGAAT ATGAGAATTG GGTTAAACGT 
GTGAATATAG ATTAA
 
Protein sequence
MHNFLPFAWF EGQCIPFNDA KLSIATHALH YGTAAFGGMR AIPDPNNSKS FLLFRADKHA 
KRLCQSAKFL MTELDEDFVL NSLETFLVKN KPTQPVYIRP FVYTSDLGIA PRLHNIETNF 
FIYGIELGDY LSPDGVTCRV SSWTRQQDNS LPLRGKISGA YITSSLAKTE AVKSGFDEAL 
LLNSQGKVSE ASGMNIFIVR NGDLITPGVD QDILEGITRA SVIELAKSNG INVIERPVDK 
TELFISDEVF LTGTAAKITP IKMIETTLMS KEMPTMNLLR DKLTKITEGL VPEYENWVKR 
VNID