Gene PMN2A_0328 details

Gene Information

• Locus tag: PMN2A_0328
• Symbol: uvrC
• ID: 3605701
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 867862
• End bp: 869784
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637687187
• Product: excinuclease ABC subunit C
• Protein accession: YP_291523
• Protein GI: 72382168
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.462253
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAACTAA CACCGTTAAT AAGGGACAAG TCAAGATTAT CGGATTTTTT AAAGGATATA 
CCTAATGATC CTGGATGTTA TTTGATGAAA GATGGTGAGG ATAGATTGCT TTATGTTGGT 
AAATCTAAAA AGTTAAGGAA TAGAGTTAGA AGTTATTTTC GTTCAGGTAA TGAATTAAGT 
CCTAGAATAT CTTTAATGGT GAGACAAGTT GCAGATATTG AATTGATTGT TACTGATAAT 
GAAAGTGAAG CATTAACATT AGAATCAAAT TTAATTAAAT CTCATCAACC ATATTTCAAT 
GTTTTACTAA AAGATGATAA AAAGTATCCC TATGTTTGCA TTACATGGGG TGATAAATAT 
CCAAGAATAT TTTTAACTAG AAAAAGGCGT CAACGACAAT TAAAAGATAA ATATTATGGT 
CCTTATGTAG ATGTTTATTT ACTTAGACAG ACTCTATTTA GTATAAAAAA ATTGTTTCCA 
CTCAGGCAAA GAAGAATTCC ACTTTATAAG GATAGAACAT GCCTTAATTA TTCAATTGGA 
AGATGTCCTG GTGTTTGTCA GGAAGAAATA AGTTCAGAAG ATTATAAAAA CACTTTAAAA 
CGTGTTGAAA TGATATTTCA AGGAAGAACA GATGAATTAA GAATATTATT AGAAAAACAA 
ATGATTTCTT TTTCAGAGTC ATTGAAATTT GAAGAGGCTG GATCAGTTAG AGATCAGCTT 
AAGGGTATAG ATAGATTGTA TGAATCTCAA AAGATGATTA TTCCTGATTC ATCTGTTTGT 
AGGGATATAA TTGCAATGGC ATCAGAAGAA AATATAAGCT CAGTACAAAT TTTTCAAATG 
CGATCAGGTA AATTAATTGG TCGTTTAGGA TATTTCTCAG ATAATAGTAA TTTTAATTCA 
TCTCAAATAC TTCAACAAGT AATAGAAAAT CATTATTCAA ATGTAGATCC TGTTGAAATC 
CCATCAGAAA TATTAGTTCA ACATCAACTT GTAAATAATA TTTTAATTTC AGATTGGCTT 
AGTGAAATAA AAAAACAAAA AGTTAATATA AATGTTCCTA AAAGATCTAG AAAAGCAGAG 
ATTATTAAAC TCGTAGAAAA AAATGCTAAT TTAGAATTAC AAAGAATTAA ACAATCTCAG 
GATAAGAATT TAGTTGAACT TGATGATCTG ACTAATATCC TTGATTTAGA AAATATTCCA 
AAGAGAATTG AATGTTATGA CATAAGCCAT ATCCAAGGAA GTGATGCTGT TGCATCACAA 
GTAGTATTTA TTGATGGTAT TGCGGCAAGG CAACACTATA GAAGATATAA AATTAAAAGC 
CCGAATATAA AAATTGGTCA TAGCGACGAT TTCGAATCAA TGGCTGAAGT GATAACTAGA 
AGATTTAGAA GATGGGCTCG TTTTAAAGAA GAAGGTGGAG ATATTGATGC CCTATTAAGT 
AATGAAAGCA GTGTTCTTGA TAATCTGAAT TTAAATGACT GGCCAGATCT CGTTGTGATA 
GATGGAGGTA AAGGTCAATT AAGTTCTGTC GTAGCAGCTC TTGAGGGCCT GAAACTTGAT 
CAAAATTTAA ATGTCATTTC TTTAGCAAAA AAGAAGGAGG AAGTTTTCAT TCCGAAGGTT 
AAACAATCAT TAGTTACCGA ATCAAATCAA CCAGGAATGC TTTTGCTAAG GAGACTGAGA 
GATGAGGCTC ATAGATTTGC AATTACTTTT CATAGACAAA AAAGGAGTCA ACGGATGAAA 
CGTTCTCAGT TAAATGAAAT ACCGGGTCTT GGACCTCAAA GAATAAAATT ATTGCTTGAG 
CATTTCAGGT CAATTGAGGC AATTCAAATG GCTACTTTTT CTGAACTTTC ATCAACACCA 
GGCTTAGGCA GATCAACTGC TGTTGTTATT AGAAACTATT TTCATCCCGA TAAAAATATA 
TAA 

 

Protein sequence

MELTPLIRDK SRLSDFLKDI PNDPGCYLMK DGEDRLLYVG KSKKLRNRVR SYFRSGNELS 
PRISLMVRQV ADIELIVTDN ESEALTLESN LIKSHQPYFN VLLKDDKKYP YVCITWGDKY 
PRIFLTRKRR QRQLKDKYYG PYVDVYLLRQ TLFSIKKLFP LRQRRIPLYK DRTCLNYSIG 
RCPGVCQEEI SSEDYKNTLK RVEMIFQGRT DELRILLEKQ MISFSESLKF EEAGSVRDQL 
KGIDRLYESQ KMIIPDSSVC RDIIAMASEE NISSVQIFQM RSGKLIGRLG YFSDNSNFNS 
SQILQQVIEN HYSNVDPVEI PSEILVQHQL VNNILISDWL SEIKKQKVNI NVPKRSRKAE 
IIKLVEKNAN LELQRIKQSQ DKNLVELDDL TNILDLENIP KRIECYDISH IQGSDAVASQ 
VVFIDGIAAR QHYRRYKIKS PNIKIGHSDD FESMAEVITR RFRRWARFKE EGGDIDALLS 
NESSVLDNLN LNDWPDLVVI DGGKGQLSSV VAALEGLKLD QNLNVISLAK KKEEVFIPKV 
KQSLVTESNQ PGMLLLRRLR DEAHRFAITF HRQKRSQRMK RSQLNEIPGL GPQRIKLLLE 
HFRSIEAIQM ATFSELSSTP GLGRSTAVVI RNYFHPDKNI