Gene PMN2A_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0286 
Symbol 
ID3605658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp826146 
End bp827795 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content28% 
IMG OID637687144 
ProductPMT family 4-amino-4-deoxy-L-arabinose transferase/ glycosyltransferase 
Protein accessionYP_291481 
Protein GI72382126 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.19601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTC CTTTATCTAA TGTTATTAAC TATATGAAGA TTAAAGTAGT AGTTTTAAAT 
TTTTTCTTAA AGAACAAAAA AATTATTTTA CCTTTCTTTG CTATTCTTTT TTTTATATCA
CTTTATTTCC TTATCGATTT TTCTAGTCAA AGTCTTGTCG CTCATGACGA GGGACTTTAC
GCGAGAAGAG CAAGATTGAC TGAGTCCTCT GCTAATTGGT TTTCCCCCCC CTTCATATCC
CCTCACCATA AGACAGTAGG AAGTTATTGG TTTATAGCAT TATCTATAAG GTTGTTTGGG
AATAGTGAAC TAGCTGTAAG GCTTCCAAGT ATTCTTTCTT CTTTCCTTTG CTTAATAACC
TCATACTTAA TAGCATTAAA AACTACAAAT AGTAAGTCTG CATTGATTTC TTTGTTTTCA
CTTTCATCAA TGCCATTATG GATTCAATAT TCAAGATATG CAAGTCCAGA TCTACCATTT
GTACTTTGTA TTCTATTAGT TATATTATTT TTCCTTAAAT CACTAGATTC TTCAAAATAT
ATAAGTCAGT ATTTAAATTT ATTTTGTTCA GGCCTTTTTA TTTCTTCTTC TTTTTTTATT
AGAAGTTATA TGGCCTTTGT TCCTTTTATA GGTCTAACCC CTTTCATTTT TTATCATTTA
TTTAGAAAAA AGTTTACTTT TAAACTTTTC TTTTGTACTG GAATAGCTGT TGGGTTTATT
CCCACGTTTC TTAATCTGTA TTTTTCGTTT CAAAAGTTTG GGATCTCCGG AATTACAAGC
CTTTTTGATT TTGCAAAGAA ACAGGCTCTC GGTGAAGTTT CTTTTAATAA TTTATTACTC
GTACCTGTTA ATTTTCTTTA TTTAACATTT CCGATTGGAA TATTACTTCT TTTTCTTTTT
GTATTCACTG GATCCAATAA TAAGGCTAAA TATCCATTAT TGATTTATTG TTACCCTCTT
TTATCTTTAA TCTTACTATT ATGCATGTCT AGATCATATC CACATTATTA TCTTTTTCTC
TTACCTTCTT TATCTATAAT CTTTGCCAAC TACCTAACAT CTAATTCACC TAGATATTCA
TTTTCAAGCT CTATTATTAG CTATTTAGTC TTTATTCTAC TTTTAATCTT ATCATCTGTT
CTATTATTTT CAATTCTTAG ATTTTCAGAC CAAGTACTTC TTTATTCAAG AGGAAATCCC
TTAATAGTGT ATATTCTTAT CTCATTAATT GTGTTATCCT ATATTACTTC ACTTAGATTT
CTATTTGATA TTAAATATCC AAATTCTAAT ATTATTAATT TCTTTTATAA TATAATCATA
CCGCAATATA TTTCTTTATC ATTATTATTT AATTTTGGTG TGCTAGGTAA TCCCAATCTT
AATACGAAAC TTTTCCTGAA GGACGCAGAT GTTTCATCAA TTATAAACTC TAATACTATT
TATCTATTTA GTGTTGACAG TAAGATTCAG ACTTTACTAT CGTATTATTT ACCTTCCTCT
GTGATTGTAG ATGAGTTTGA AGTAATTAGT AAATATAAGT ATGTAATTAC TTCTAATGCT
AATTCATTAG AAAAATTAAA ATACAAACAA ATCTTTGTTC CTGTTAAAAA ATTTGACAAT
CACTTATTAT TAATGAATAT TGACTCATAG
 
Protein sequence
MQIPLSNVIN YMKIKVVVLN FFLKNKKIIL PFFAILFFIS LYFLIDFSSQ SLVAHDEGLY 
ARRARLTESS ANWFSPPFIS PHHKTVGSYW FIALSIRLFG NSELAVRLPS ILSSFLCLIT
SYLIALKTTN SKSALISLFS LSSMPLWIQY SRYASPDLPF VLCILLVILF FLKSLDSSKY
ISQYLNLFCS GLFISSSFFI RSYMAFVPFI GLTPFIFYHL FRKKFTFKLF FCTGIAVGFI
PTFLNLYFSF QKFGISGITS LFDFAKKQAL GEVSFNNLLL VPVNFLYLTF PIGILLLFLF
VFTGSNNKAK YPLLIYCYPL LSLILLLCMS RSYPHYYLFL LPSLSIIFAN YLTSNSPRYS
FSSSIISYLV FILLLILSSV LLFSILRFSD QVLLYSRGNP LIVYILISLI VLSYITSLRF
LFDIKYPNSN IINFFYNIII PQYISLSLLF NFGVLGNPNL NTKLFLKDAD VSSIINSNTI
YLFSVDSKIQ TLLSYYLPSS VIVDEFEVIS KYKYVITSNA NSLEKLKYKQ IFVPVKKFDN
HLLLMNIDS