| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0235 |
|---|
| Symbol | |
|---|
| ID | 3605606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 783508 |
|---|
| End bp | 784305 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637687092 |
|---|
| Product | putative multidrug efflux ABC transporter |
|---|
| Protein accession | YP_291430 |
|---|
| Protein GI | 72382075 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.18832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAATAT TTGGATTGTC TTTCAAGGTC ATTAAGACCT TACTTACAAC GCAATATGCA
TACATGTTGG AATATCGCAT CGAAATAGCT TTGTGGGCTC TTTCTGGAGT ACTACCATTT
ATTATGTTTT CTCTTTGGAG TCAAAATGAT GTTGGCAATT CATTTGGTCT AAATGATATA
GGGTTGGCAA GATATTTTTT AAGTGCTTTT CTAGTTAGGC AATTTTCAGT TGTTTGGGTT
GTCTTCTCGT TTGAGGAAGA TTCTCTTTCT GGTCGATTAT CTCCATATTT GCTGCAGCCT
TTGCACCCTC TATTTAGATA TGTTGCTTCT CACTTGGCAG AGCAGGCAAC AAGACTTCCT
TTCGCAATAG CCATAGCTAT TACTTTTTTT ATATTAAATC CATCATCTTT TTGGCTTCCC
TCACTACCTC AATTGTTTTT GGCGTATTTA TCAACTCACT TCGCTTTTAC TATTGCTTTT
CTTCTTCAAA GTTTAGTCGC TGCACTTTGC TTTTGGACTG AAAAATCTAG CGCTCTTGAG
AGATTAATAT TTGTTCCTTA TCTTTTTCTT TCTGGTTTAT TAGTACCTTT ATCAGCCTTT
CCTTCTAACG TTCTAAAAGT AGCAATGTTA ACGCCATTTC CCTATCTAAT TAATTTTCCA
GCAAAGATTT TATCTGGGAT GCCAGTTGAT ATTTTTAATG GCTTTTTAGC TCAGATTTTG
TGGATTTCAA TACTGGTACC TTCTGTAAAT ATTCTTTGGA AACTTGGCGT AAAGAGATAT
ACAGCAATGG GAGCCTAA
|
|---|
| Protein sequence | MRIFGLSFKV IKTLLTTQYA YMLEYRIEIA LWALSGVLPF IMFSLWSQND VGNSFGLNDI
GLARYFLSAF LVRQFSVVWV VFSFEEDSLS GRLSPYLLQP LHPLFRYVAS HLAEQATRLP
FAIAIAITFF ILNPSSFWLP SLPQLFLAYL STHFAFTIAF LLQSLVAALC FWTEKSSALE
RLIFVPYLFL SGLLVPLSAF PSNVLKVAML TPFPYLINFP AKILSGMPVD IFNGFLAQIL
WISILVPSVN ILWKLGVKRY TAMGA
|
|---|
| |