Gene PMN2A_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0146 
Symbol 
ID3605516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp699225 
End bp699710 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content26% 
IMG OID637687002 
Productlipoprotein signal peptidase 
Protein accessionYP_291341 
Protein GI72381986 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAA TTAACAGAAA AAATATTAAT GTCATCACTT ACTCTTTTTA CATTGTTTTA 
TTAGATCAAG TCAGTAAGTT CTTGATATTG AATACATTAG GATTTGAAAG ATCTCAAAAT
ATTATTCCTA ATTTATTAAA TTTCACCCTA GTAAAAAACA GAGGAGCTGC ATTTAGTCTT
CTAAGCAATT CCACAAGCCT TCTTACTATT ATAAGTATTC TAGCCTCATT ATTATTAATC
ACTGTTATAA TAAGATTTCC GCCAAGATCT TATTGGAATT TGAATGGACT TGCCTATCTT
TTAGGTGGTA CTTTAGGTAA TGGAATTGAT AGATTATTCA AAGGTTATGT TCTTGATTTT
TTAGATCTTG TTCCAATTAA TTTCCCTATT TTTAACGTAG CAGATATAGC AATAAACATT
GCTATAATTT GTTTTATAAT TGATATAATT AAAACTAAAG ACAAATCAAA ATTAAATGAA
TGGTAA
 
Protein sequence
MTLINRKNIN VITYSFYIVL LDQVSKFLIL NTLGFERSQN IIPNLLNFTL VKNRGAAFSL 
LSNSTSLLTI ISILASLLLI TVIIRFPPRS YWNLNGLAYL LGGTLGNGID RLFKGYVLDF
LDLVPINFPI FNVADIAINI AIICFIIDII KTKDKSKLNE W