Gene PMN2A_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0029 
Symbol 
ID3605398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp580101 
End bp582212 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content37% 
IMG OID637686884 
Productpeptidase family M3 
Protein accessionYP_291224 
Protein GI72381869 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAA TAAAGCCAAC AGCTCTATTA AAAGGTGAAG GCCTTCCTGA TTACGATAAA 
ATCACCCCTA ACGAGATCAC TGAAAATATA CCCAAGCTTA TAAAAGAACT AAATGAAAAA
TTAGATAAAC TAGAAGTACA ACTCGAAAAA CAATTACAAA CTAAAAGCTC ACTTAGTTGG
GATGATGTAA TGCCTCAGCT TTATGAAATA GGTGAAAAGC TTAGGTGGAG TTGGGGGGTT
GTAAGTCATC TGAATGCAGT ATGCAATTCC ACTGAATTAC GTGCAGTTCA TTCAAATCAG
CAACCTACAA TCGTTAGATT TAGCAATCAG CTCGCTCAAA ACGAGGTCAT TTTTAAGGCG
CTCTTAAATT TAAAAGAGCA TGGAAATATA AAGGACGAAA CACAAATAAG AATACTTGAG
ACAGAACTCA TAACCATGAA AAACAAAGGG ATCGGTCTAG AAGCTGATGA AAAAACACTA
TTTAATTCTC GTAGTGAGCG ACTAGCCGAA TTGTCAACGA CATTTAGTAA CAACGTATTA
GATGCTACTA AGAATTGGAG CCTTTTATTA AAAAACAAAT CAGAAGTCGA GGGGCTTCCT
GAAAGAGCAC TTGAAACATT GGCTCTTGCG GCAAAGGAAG CTGGTGACAA AGATGAAGAA
GGTAATGACC CGTCATCAGC AATTGGACCA TGGAGAGTTG GGTTAGATTT GCCTAGGTAC
ATTCCTTTTC AAACCTATGC AAAAAATAGA CGTATTAGAG AGAAAGTCTA CAGAGCTTTT
GTAAGTAGAG CTAGCGATGG AAAGATTAAT AATAAAAAAA TAATCGAAGA AATTCTAGAT
CTCAGAAACA AACAGGCAAA ACTATTAGGA TATAAAAATT GGTGTGAAAT TAGTTTAGCC
ACAAAGATGG CGGACAATGA AGAAGCTGTT GAGATGTTAC TAGAAGAATT ACGAATAGCA
GCAATACATC ATGCCGAAAA AGAAGTAATA CATCTTCGTG AGTGTGCCAA AAGAAATGGA
GAAAACGAAG ATTTTGAGCT ATCTCCATGG GATATAAGTT TTTGGTCCGA AGTTCTTCGC
AAAGAGAAAT ACGATCTTGA CCAAGAGAAA CTCAGGCCAT GGTTTCCTCT AGATCAAGTT
CTTGATGGTC TATTCAATCT GTGCAAAAGA CTTTTTGAAA TTGACATTGA AGAAGCAATT
AATACAGCTC CTTTATGGCA TGAAGATGTT CGTTTCTTCA ATGTTAAAAA TATAGATGGC
CAAAAAATTG CATCTTTTTA TCTAGATCCA TTCAGTCGTC CTGCGACAAA AAGAGGAGGG
GCCTGGATGG ATGAATGTTT GTGCCGAAAT CAAAAAACAA AAGATGATAT TGTTCTCCCA
GTAGCCTATT TAGTCTGCAA TCAAACTCCT CCAATTGCTA ACAAACCCAG TCTTATGAGT
TTCGAAGAAG TAGAAACTCT CTTTCATGAA TTTGGGCATG GACTACAACA TATGCTGACA
ACTATAAATT ACCCTCAAGC AGCCGGTATT AATAACGTCG AATGGGATGC TGTCGAATTA
GCAAGCCAAT TCATGGAAAA TTGGTGCTTG GAGGATCAAA CAATTTCTGA AATAGCAATA
CATTGGAAGA CGAAAGAACC ATTACCAGAA TCTGAAATCA ATAAATTAAG GCAAAGCAGA
ACATTTAATT CTGGGCTAGC GACTTTAAGG CAAATACATT TTGCTCTTAC TGATCTAAAA
CTCCATAGTC AATGGAATGA AGATTTAGAA ATTTCCCCAG ATGAGTTTCG ACGAGAAATC
GCAAAAAATA CAACAGTAAT GGAGCCTATT CCAGAAGATC AATTTCTCTG TGCCTTCAGT
CATATTTTTG CTGGTGGCTA TGCTGCTGGA TACTACTCTT ACAAATGGGC TGAGGTACTC
AGTTCTGACG CCTTTGCCGC TTTTGAAGAG GCAGGCCTTG CTAATCAGGA TGAAGTAAGA
AAGATTGGTA AAAAATATCG AGATTCAATT CTTAGTCTTG GTGGTAGTCG TTCACCCAAT
AAGGTTTTCA AACAATTTAG AGGAAGACTT CCCTCTACTG AAGCACTAAT AAGACATAGT
GGTCTTAATT AG
 
Protein sequence
MTSIKPTALL KGEGLPDYDK ITPNEITENI PKLIKELNEK LDKLEVQLEK QLQTKSSLSW 
DDVMPQLYEI GEKLRWSWGV VSHLNAVCNS TELRAVHSNQ QPTIVRFSNQ LAQNEVIFKA
LLNLKEHGNI KDETQIRILE TELITMKNKG IGLEADEKTL FNSRSERLAE LSTTFSNNVL
DATKNWSLLL KNKSEVEGLP ERALETLALA AKEAGDKDEE GNDPSSAIGP WRVGLDLPRY
IPFQTYAKNR RIREKVYRAF VSRASDGKIN NKKIIEEILD LRNKQAKLLG YKNWCEISLA
TKMADNEEAV EMLLEELRIA AIHHAEKEVI HLRECAKRNG ENEDFELSPW DISFWSEVLR
KEKYDLDQEK LRPWFPLDQV LDGLFNLCKR LFEIDIEEAI NTAPLWHEDV RFFNVKNIDG
QKIASFYLDP FSRPATKRGG AWMDECLCRN QKTKDDIVLP VAYLVCNQTP PIANKPSLMS
FEEVETLFHE FGHGLQHMLT TINYPQAAGI NNVEWDAVEL ASQFMENWCL EDQTISEIAI
HWKTKEPLPE SEINKLRQSR TFNSGLATLR QIHFALTDLK LHSQWNEDLE ISPDEFRREI
AKNTTVMEPI PEDQFLCAFS HIFAGGYAAG YYSYKWAEVL SSDAFAAFEE AGLANQDEVR
KIGKKYRDSI LSLGGSRSPN KVFKQFRGRL PSTEALIRHS GLN