Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0025 |
Symbol | |
ID | 3605394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 573694 |
End bp | 577653 |
Gene Length | 3960 bp |
Protein Length | 1319 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637686880 |
Product | hypothetical protein |
Protein accession | YP_291220 |
Protein GI | 72381865 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAGATG AGTGGAGCTC TAAAAGATTA AAGCGTTGGG GACTTGCTGG AACCTTTGCT GCGTTGGGTG GTGTTTTGAT TTGGAGTGGC GCAGATCTAC TAGTAGATAG AACTATAAGC CGTTTTTCTC CACAAATAGA AAAAACATTA TCTAATTCAT TAGGTCATCC TTTAAAAATA GGTTCATACA GGGGGCTCAG ACCATGGGGA GTTGAGTTAG GGCCAACAAG GCTCCTTCCA GGGATTAAAG ATTCTTCTTC AGTTAATATT TCAAATTTAA CAATTAAATT TGCTCCTTTT GCGAGTTTAT TGAATTGGAA ACCAGTAGCA ATATTTAATC CAAAAGGAAC AGAAATTATA TTAAACAAAA ATGATACTGG TTCATTTTGG GTTGTTCCCC AGAAAGATAA TCCTAAACAA ATCAATCTTC AACTAAAATT TAATTTAAAA GAACCAACCA AAATTGTATT TAATGCTGGG GATACGACAT TATTAGCAAA AGGTAATCTA TCTCTAAATC TTGGTGAGAA AAAAATTTTT GGTGCGATTA ATCTAGAGTC CAAAGAACAA GGAAGCCTCT ATCTTTCAGG AAAGGGTTAT TGGGATGGAA TCGAATTTCA AACTAAAGTA AAAATCAATA AACTTAGTCT TTCTATCTTT GAGAGAATTT TAGGAAATAA TTCTAATTTT ATTGCAAGAG GAAATATAAA TGGAAGTCTA AAATTGGGAG TTAAGAAAGG CTTGATAAGG TGTAATGGTG GTTTATTGCT TAATAACTTA ACTCTGATGG GAGGGCCTCT AAGTGATACA TTGTCTACAA ATAATTCAAA AATAGAATGT GATAAAAATA AGCTTAAGTT AATTGATTCT AATTGGAATT ATGGATATTG GGATATATCT AATTCATCTG AAATACCATT CTATAAAAAA GATAAAACTT ATATAAATTC TGAAACTACT ATTAAAATTA AAGATTTTGA TCATAAACCA CTTTCTTTAA AATTAAAATT ACCAATCTCA GTAGTTGACA GACAATTTAT TCCTGGGGAA CTTAATGCTA ATTTTAATTT AGAATCTTTT CCTTTAGGTG CTTTAAATCC AATACTAAAT GCATCATTAT CAGGGAAATT AAATACAAAA GGTGATTTTC AGGGTCCTTT ATCTTCTCTG AACTCTACTA TTAACCTTTC CTTGGAAAAT CCACAAGTTA ATGGTATTCG ATTAAGGGAA AAATGGAGAG GTTCTTTTAC TCGAATTCCA AGTGAAAAGA AGTGGGGGAG TTTGAGAATG AAATCAGAAG GTGCTTCTAT CCCAGCTAAT CTTCAAATTA ACTTTAATAA GGATGGTGAT TTTAATGATT TAAATCTAAA TAGATTAGGA GGTGAAATAA GTCTAAATCC TAAATCAAAT GCTTTTGAAT GGGAGGCTAA TAAATTCAAA TTAGATCGTG TAGAAGTGGC ATTCCCGCCA GAGAAAAGTT TTAAACGAAT CTTTGGGGAA GTTACAGGTA ACGGATTATT TTCTCTTGAC CCATTATTTC TTAATGGTGA TTTGAGTTTA GATTATTTTA GATTGTTAGG TTTCAAATTA AAAAATGCAA GTATTAAAGG TCAAATTAAA AATTCAGAAA CTAATTTAAC AGGTGAATTA ATACCATCTG AAAATGGAAA GATTAAATTT GATATTAATA ATGGCTCCGA ATTTTCTTTG TTAGCTCAAG TGAAGGATGT AAGCGCTAGT TGGATTACTG CTACAGCTTT AGAGTTTCCT AAATTAGGAT TGAAATATTC AGATGCAATT GGGAAGGCTG AAGATTTAGA AAAATTTATA ATTGGTTATC CAATTAGTTC TATAGATTCT CAGTTCGAAG CTTTAACTAG GTCTCAAGAT TCATATAGAG AAGAGATTTC TAAGGTAAAT AGTGAGAGCA TTATTAATCC TTATGATCTA AAGGGGGATA TTAATGCTGA TATTAAATTA AGTGGTCCAA ACCTATCTGA TTTAAATTTA GAAGCAAAAG CTTTTGGTAA GGTTTGGACA AATAAATTAA AGATTATAAA TTCTAATAAA ATCAGACCCT TTAAGGTAAC TTTTAATGGG AACCTAGCTT CAGGTCTGGG AGATTTTTCT TTACTTAATT TAAATTTTTC ATTATTATCT CTAGTTGCGC CAATACCTTC AGCGGTTGAT GGGTATTTTG GTTTAAAAGG TAAATATAGT TTAGCTAATT CAACTCCACA AGTTACAGCA GATTTAATTA TTAAAGATAC AGTAATTTAT AACAGAAAGA TTATTTTAGA TAATGGAAAT ATTATATTTA AAGACAATAA TCTCGAATTT GATATCACTC TAAGGGATAA ATCTTCGGCA AATCCTGTTA AGTTAGGTGG AACCTACCCA TTAATTAGTT CTTATCCTAT TGATCTAAAG ATCGAAAGTC ATGGAGATGG GTTAGCGTTC TTGACTGGGC TAACGAAAGG GAATGTCTCT TGGACCTCAG GGACAGCTGA TCTAAGCTTG TTGATTAGAG GAACCCCTGC GAAACCGGTT GCTAATGGTT TTTTGGTTTT AAAAAACAGT GAGCTACTTT TTCAAGATAA AGAAATTAAT AATTTGAATA GCACAATAGT TTTTGATTTT AATCGAATTG AAATCCGTGA TCTAAAAGCA AATATGGGGG CTAACGGCAT TATTAGCAGT CAAGGTGGAA TTTCGTTGTT TGATTCTCAA TTAAGTGAAA GCGAGCCATT GGCTCTTTCG ATAGAAAAAA CACGTATTAA GACGGCATTT ACTGACATCA GAGCTTCGTC TAGCCTTGTT GTTAAGGGAT CTATTTTGAA ACCTCAATTA TCAGGTGAAG TCTTTATCTC AGAAGGTTCG ATTTTTGCTA AAAGGGCTAA AAATCCAAGT AAGACTTCAT CTGAAAAATC GGATCGTTAT CAAGATTCTA AGGTCAGAAT AATTCGTAGA TTACCAGAAC AAAACTGGAA CCAGAAAGAA CCTCTGGTTT TATTTATTCA AGATGAAGAT GCACCTGCAA GTCGAATAGT TAGTGCTGGT TTGCCTAATG GATTTGAATC ACTAACCTTT GATAATTTAA AGCTCGCACT TGGCCCTTCA TTGCGATTAG TTTCTCAACC CTTGGCAAGC TTTGAAACAA ATGGATTCCT TATCTTGAAT GGCGCTTTTG ACGAGACCCT TGATGTTAGT GGAGTTATTA AACTTGATAG TGGCTACGTT AATCTCTTTA CGACTACTTT TAATCTAGAT CAAAGTGAAC CAAATGTAGC CGTATTTGTA CCATCTATGG GCTTGGTTCC ATATATTGAT GTGACTCTGA ATAGCCGCGT TCCAGATAAT GTTAGAGACG TAAGTAATTT TTCCTCTAAT GGCATGGCAT CATTTGGTAT TGGAGGATCT CGTTTCGTAA ATGTTGAAGT GGCGGCTTCT GGACCTGCAG ATCGCATTAG TGAAAATTTT CAATTGAGAA GTACTCCATC TTTGGGAAGA AGTGAGTTGA TAGGACTTTT AGGAGGTAAT TCTCTTGCAA ATCTAATAAG TAGTGGAGGC AATGGTGATG TACTTGCGAG CTTTTTGAAT AGATCTTTTG CTTCGTATCT TCAAGGCAAT ATCAATGGTT TTTTGAGTGA TAGGCTTCAA ATATCATTGT ATCCGGCATA TATAAATGGA TCAGATTCAG AGGATGATAC TAGTGATAGT AGTTCTTCAA GTGCTGACCA GGAAGATACT AATCTACCTG GTCAACAGGC ATGGGTGACC GAAATAGGAG TTGATCTTAA CGATAAAATT AATTTCTCAG TTCAGGCTGC TCCTAACCGA AAAGATATTC CACCGAAAGG AAATATTACT TTTCAAATGA ATCCCAACGT AGGTCTACTA GGCTCGTTTG ATAAGAATGG GAATTGGCAA AGTCAACTCC AACTCTATTT TAGATATTAA
|
Protein sequence | MGDEWSSKRL KRWGLAGTFA ALGGVLIWSG ADLLVDRTIS RFSPQIEKTL SNSLGHPLKI GSYRGLRPWG VELGPTRLLP GIKDSSSVNI SNLTIKFAPF ASLLNWKPVA IFNPKGTEII LNKNDTGSFW VVPQKDNPKQ INLQLKFNLK EPTKIVFNAG DTTLLAKGNL SLNLGEKKIF GAINLESKEQ GSLYLSGKGY WDGIEFQTKV KINKLSLSIF ERILGNNSNF IARGNINGSL KLGVKKGLIR CNGGLLLNNL TLMGGPLSDT LSTNNSKIEC DKNKLKLIDS NWNYGYWDIS NSSEIPFYKK DKTYINSETT IKIKDFDHKP LSLKLKLPIS VVDRQFIPGE LNANFNLESF PLGALNPILN ASLSGKLNTK GDFQGPLSSL NSTINLSLEN PQVNGIRLRE KWRGSFTRIP SEKKWGSLRM KSEGASIPAN LQINFNKDGD FNDLNLNRLG GEISLNPKSN AFEWEANKFK LDRVEVAFPP EKSFKRIFGE VTGNGLFSLD PLFLNGDLSL DYFRLLGFKL KNASIKGQIK NSETNLTGEL IPSENGKIKF DINNGSEFSL LAQVKDVSAS WITATALEFP KLGLKYSDAI GKAEDLEKFI IGYPISSIDS QFEALTRSQD SYREEISKVN SESIINPYDL KGDINADIKL SGPNLSDLNL EAKAFGKVWT NKLKIINSNK IRPFKVTFNG NLASGLGDFS LLNLNFSLLS LVAPIPSAVD GYFGLKGKYS LANSTPQVTA DLIIKDTVIY NRKIILDNGN IIFKDNNLEF DITLRDKSSA NPVKLGGTYP LISSYPIDLK IESHGDGLAF LTGLTKGNVS WTSGTADLSL LIRGTPAKPV ANGFLVLKNS ELLFQDKEIN NLNSTIVFDF NRIEIRDLKA NMGANGIISS QGGISLFDSQ LSESEPLALS IEKTRIKTAF TDIRASSSLV VKGSILKPQL SGEVFISEGS IFAKRAKNPS KTSSEKSDRY QDSKVRIIRR LPEQNWNQKE PLVLFIQDED APASRIVSAG LPNGFESLTF DNLKLALGPS LRLVSQPLAS FETNGFLILN GAFDETLDVS GVIKLDSGYV NLFTTTFNLD QSEPNVAVFV PSMGLVPYID VTLNSRVPDN VRDVSNFSSN GMASFGIGGS RFVNVEVAAS GPADRISENF QLRSTPSLGR SELIGLLGGN SLANLISSGG NGDVLASFLN RSFASYLQGN INGFLSDRLQ ISLYPAYING SDSEDDTSDS SSSSADQEDT NLPGQQAWVT EIGVDLNDKI NFSVQAAPNR KDIPPKGNIT FQMNPNVGLL GSFDKNGNWQ SQLQLYFRY
|
| |